[HTML][HTML] The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

…, LL Pu, NH Putman, C Rabouille, OM Ramos… - PLoS …, 2014 - journals.plos.org
Myriapods (eg, centipedes and millipedes) display a simple homonomous body plan relative
to other arthropods. All members of the class are terrestrial, but they attained terrestriality …

Calcisponges have a ParaHox gene and dynamic expression of dispersed NK homeobox genes

SAV Fortunato, M Adamski, OM Ramos, S Leininger… - Nature, 2014 - nature.com
Sponges are simple animals with few cell types, but their genomes paradoxically contain a
wide variety of developmental transcription factors 1 , 2 , 3 , 4 , including homeobox genes …

Genome and transcriptome of the regeneration-competent flatworm, Macrostomum lignano

…, J Gurtowski, X Zhou, OM Ramos… - Proceedings of the …, 2015 - National Acad Sciences
The free-living flatworm, Macrostomum lignano has an impressive regenerative capacity.
Following injury, it can regenerate almost an entirely new organism because of the presence of …

[PDF][PDF] Ghost loci imply Hox and ParaHox existence in the last common ancestor of animals

OM Ramos, D Barker, DEK Ferrier - Current biology, 2012 - cell.com
Hox genes are renowned for patterning animal development, with widespread roles in
developmental gene regulation. Despite this importance, their evolutionary origin remains obscure…

[HTML][HTML] Mechanisms of gene duplication and translocation and progress towards understanding their relative contributions to animal genome evolution

O Mendivil Ramos, DEK Ferrier - International journal of evolutionary …, 2012 - hindawi.com
Duplication of genetic material is clearly a major route to genetic change, with consequences
for both evolution and disease. A variety of forms and mechanisms of duplication are …

Silico: a simulator of long read sequencing in PacBio and Oxford Nanopore

…, S Goodwin, WR McCombie, O Mendivil Ramos - BioRxiv, 2016 - biorxiv.org
Long read sequencing platforms, which include the widely used Pacific Biosciences (PacBio)
platform and the emerging Oxford Nanopore platform, aim to produce sequence fragments …

[PDF][PDF] Long-read sequencing reveals rapid evolution of immunity-and cancer-related genes in bats

A Scheben, O Mendivil Ramos… - Genome biology and …, 2023 - academic.oup.com
Bats are exceptional among mammals for their powered flight, extended lifespans, and robust
immune systems and therefore have been of particular interest in comparative genomics. …

A Caenorhabditis elegans Model for Integrating the Functions of Neuropsychiatric Risk Genes Identifies Components Required for Normal Dendritic Morphology

C Aguirre-Chen, N Stec, OM Ramos… - G3: Genes …, 2020 - academic.oup.com
Abstract Analysis of patient-derived DNA samples has identified hundreds of variants that
are likely involved in neuropsychiatric diseases such as autism spectrum disorder (ASD) and …

Unraveling molecular mechanisms of immunity and cancer-resistance using the genomes of the Neotropical bats Artibeus jamaicensis and Pteronotus …

A Scheben, OM Ramos, M Kramer, S Goodwin… - …, 2020 - newrepository.cshl.edu
Bats are exceptional among mammals for harbouring diverse pathogens and for their robust
immune systems. In addition, bats are unusually long-lived and show low rates of cancer. …

Tackling Climate Change with Machine Learning: Fostering the Maturity of ML Applications for Climate Change

S Madadkhani, OM Ramos, M Chapman, J Dunietz… - ICLR 2024 … - openreview.net
… , Shiva Madadkhani and Olivia Mendivil Ramos will act as … Olivia Mendivil Ramos Email:
oliviamendivilramos@gmail.… 9Oc-NcwAAAAJ&hl=en Bio: Olivia is a computational biologist and …