[HTML][HTML] Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization …
Background Legumes are the third largest family of angiosperms and the second most
important crop class. Legume genomes have been shaped by extensive large-scale gene …
important crop class. Legume genomes have been shaped by extensive large-scale gene …
Haplotype selection as an adaptive mechanism in the protozoan pathogen Leishmania donovani
P Prieto Barja, P Pescher, G Bussotti… - Nature ecology & …, 2017 - nature.com
The parasite Leishmania donovani causes a fatal disease termed visceral leishmaniasis.
The process through which the parasite adapts to environmental change remains largely …
The process through which the parasite adapts to environmental change remains largely …
Third Report on Chicken Genes and Chromosomes 2015Prepared by
…, M Persia, F Pitel, L Preeyanon, P Prieto Barja… - … and genome research, 2015 - karger.com
Following on from the First Report on Chicken Genes and Chromosomes [Schmid et al., 2000]
and the Second Report in 2005 [Schmid et al., 2005], we are pleased to publish this long-…
and the Second Report in 2005 [Schmid et al., 2005], we are pleased to publish this long-…
Nextflow enables reproducible computational workflows
P Di Tommaso, M Chatzou, EW Floden, PP Barja… - Nature …, 2017 - nature.com
The increasing complexity of readouts for omics analyses goes hand-in-hand with concerns
about the reproducibility of experiments that analyze'big data'1, 2, 3. When analyzing very …
about the reproducibility of experiments that analyze'big data'1, 2, 3. When analyzing very …
[HTML][HTML] Democratizing clinical-genomic data: How federated platforms can promote benefits sharing in genomics
…, C Davison, N Raine, T Seeger, P Prieto Barja… - Frontiers in …, 2023 - frontiersin.org
Since the first sequencing of the human genome, associated sequencing costs have dramatically
lowered, leading to an explosion of genomic data. This valuable data should in theory …
lowered, leading to an explosion of genomic data. This valuable data should in theory …
[HTML][HTML] Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression
Mice have been a long-standing model for human biology and disease. Here we characterize,
by RNA sequencing, the transcriptional profiles of a large and heterogeneous collection …
by RNA sequencing, the transcriptional profiles of a large and heterogeneous collection …
The impact of biological sex on alternative splicing
Over 95% of human genes undergo alternative splicing (AS) in a developmental, tissue-specific,
or signal transduction-dependent manner. Here, we present a large-scale survey of sex-…
or signal transduction-dependent manner. Here, we present a large-scale survey of sex-…
Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression for thousands of genes
…, S Djebali, A Breschi, CA Davis, P Prieto Barja… - BioRxiv, 2014 - biorxiv.org
We characterized by RNA-seq the transcriptional profiles of a large and heterogeneous
collection of mouse tissues, augmenting the mouse transcriptome with thousands of novel …
collection of mouse tissues, augmenting the mouse transcriptome with thousands of novel …
Nextflow: DSL for data-driven computational pipelines
…, M Chatzou, E Floden, P Prieto Barja… - Astrophysics …, 2023 - ui.adsabs.harvard.edu
Nextflow enables scalable and reproducible scientific workflows using software containers. It
allows the adaptation of pipelines written in the most common scripting languages. Its fluent …
allows the adaptation of pipelines written in the most common scripting languages. Its fluent …
Centralised and distributed optimization for aggregated flexibility services provision
…, P Lloret-Gallego, E Prieto-Araujo… - … on Smart Grid, 2020 - ieeexplore.ieee.org
The recent deployment of distributed battery units in prosumer premises offer new opportunities
for providing aggregated flexibility services to both distribution system operators and …
for providing aggregated flexibility services to both distribution system operators and …