User profiles for P. Whetzel
Patricia L. WhetzelAssistant Research Professor, University of Colorado Verified email at tislab.org Cited by 12307 |
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
The value of any kind of data is greatly enhanced when it exists in a form that allows it to be
integrated with other data. One approach to integration is through the annotation of multiple …
integrated with other data. One approach to integration is through the annotation of multiple …
The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019
…, D Suveges, O Vrousgou, PL Whetzel… - Nucleic acids …, 2019 - academic.oup.com
… Full P-value SS are defined as the aggregate P-values and association data for every … user
queries; for example, retrieving P-values and associated fields, P-value plus the effect allele …
queries; for example, retrieving P-values and associated fields, P-value plus the effect allele …
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource
…, R Stefancsik, J Stewart, P Whetzel… - Nucleic acids …, 2023 - academic.oup.com
… At the time of our previous publication (10), there were no full P value summary statistics
from aggregate analyses openly shared to our knowledge. We now accept submissions of these…
from aggregate analyses openly shared to our knowledge. We now accept submissions of these…
BioPortal: ontologies and integrated data resources at the click of a mouse
Biomedical ontologies provide essential domain knowledge to drive data integration, information
retrieval, data annotation, natural-language processing and decision support. BioPortal …
retrieval, data annotation, natural-language processing and decision support. BioPortal …
BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications
The National Center for Biomedical Ontology (NCBO) is one of the National Centers for
Biomedical Computing funded under the NIH Roadmap Initiative. Contributing to the national …
Biomedical Computing funded under the NIH Roadmap Initiative. Contributing to the national …
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data
…, J Schug, CJ Stoeckert Jr, P Whetzel - Nucleic acids …, 2003 - academic.oup.com
PlasmoDB ( http://PlasmoDB.org ) is the official database of the Plasmodium falciparum
genome sequencing consortium. This resource incorporates the recently completed P. …
genome sequencing consortium. This resource incorporates the recently completed P. …
[HTML][HTML] The ontology for biomedical investigations
… Field D, Garrity G, Gray T, Morrison N, Selengut J, Sterk P, et al. The minimum information
… Maguire E, González-Beltrán A, Whetzel PL, Sansone SA, Rocca-Serra P. OntoMaton: a …
… Maguire E, González-Beltrán A, Whetzel PL, Sansone SA, Rocca-Serra P. OntoMaton: a …
The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics
The Functional Genomics Experiment data model (FuGE) has been developed to facilitate
convergence of data standards for high-throughput, comprehensive analyses in biology. …
convergence of data standards for high-throughput, comprehensive analyses in biology. …
[HTML][HTML] BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
The application of semantic technologies to the integration of biological data and the
interoperability of bioinformatics analysis and visualization tools has been the common theme of a …
interoperability of bioinformatics analysis and visualization tools has been the common theme of a …
[HTML][HTML] A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
… The RNA extraction and labeling are described in the Material processing protocol, P-XMPL-1.
Raw data files (Data1.cel, Data2.cel and Data3.cel) are obtained, and then normalized …
Raw data files (Data1.cel, Data2.cel and Data3.cel) are obtained, and then normalized …