User profiles for Patricia L. Whetzel

Patricia L. Whetzel

Assistant Research Professor, University of Colorado
Verified email at tislab.org
Cited by 12325

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019

…, D Suveges, O Vrousgou, PL Whetzel… - Nucleic acids …, 2019 - academic.oup.com
The GWAS Catalog delivers a high-quality curated collection of all published genome-wide
association studies enabling investigations to identify causal variants, understand disease …

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

…, RH Scheuermann, N Shah, PL Whetzel… - Nature …, 2007 - nature.com
The value of any kind of data is greatly enhanced when it exists in a form that allows it to be
integrated with other data. One approach to integration is through the annotation of multiple …

BioPortal: ontologies and integrated data resources at the click of a mouse

NF Noy, NH Shah, PL Whetzel, B Dai… - Nucleic acids …, 2009 - academic.oup.com
Biomedical ontologies provide essential domain knowledge to drive data integration, information
retrieval, data annotation, natural-language processing and decision support. BioPortal …

BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications

PL Whetzel, NF Noy, NH Shah… - Nucleic acids …, 2011 - academic.oup.com
The National Center for Biomedical Ontology (NCBO) is one of the National Centers for
Biomedical Computing funded under the NIH Roadmap Initiative. Contributing to the national …

[HTML][HTML] The ontology for biomedical investigations

…, CF Taylor, C Torniai, JA Turner, R Vita, PL Whetzel… - PloS one, 2016 - journals.plos.org
The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with
precisely defined meanings to describe all aspects of how investigations in the biological and …

The national center for biomedical ontology

…, NF Noy, NH Shah, PL Whetzel… - Journal of the …, 2012 - academic.oup.com
Patricia L Whetzel , Patricia L Whetzel … Mark A Musen, Natalya F Noy, Nigam H Shah,
Patricia L Whetzel, Christopher G Chute, Margaret-Anne Story, Barry Smith, and the NCBO team, …

[HTML][HTML] A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

…, G Sherlock, CJ Stoeckert, J White, PL Whetzel… - BMC …, 2006 - Springer
Background Sharing of microarray data within the research community has been greatly
facilitated by the development of the disclosure and communication standards MIAME and …

[HTML][HTML] High-performance web services for querying gene and variant annotation

…, BJ Ainscough, OL Griffith, A Torkamani, PL Whetzel… - Genome biology, 2016 - Springer
Efficient tools for data management and integration are essential for many aspects of high-throughput
biology. In particular, annotations of genes and human genetic variants are …

The MGED Ontology: a resource for semantics-based description of microarray experiments

PL Whetzel, H Parkinson, HC Causton, L Fan… - …, 2006 - academic.oup.com
Motivation: The generation of large amounts of microarray data and the need to share these
data bring challenges for both data management and annotation and highlights the need for …

[HTML][HTML] The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside

…, L Schriml, PJ Tonellato, PL Whetzel… - Journal of biomedical …, 2011 - Springer
Background Translational medicine requires the integration of knowledge using heterogeneous
data from health care to the life sciences. Here, we describe a collaborative effort to …