User profiles for Paul G Fahey
Paul FaheyResearch Engineer, Stanford University Verified email at stanford.edu Cited by 80 |
Functional connectomics spanning multiple areas of mouse visual cortex
To understand the brain we must relate neurons’ functional responses to the circuit architecture
that shapes them. Here, we present a large functional connectomics dataset with dense …
that shapes them. Here, we present a large functional connectomics dataset with dense …
Inception loops discover what excites neurons most using deep predictive models
…, T Muhammad, E Froudarakis, PG Fahey… - Nature …, 2019 - nature.com
Finding sensory stimuli that drive neurons optimally is central to understanding information
processing in the brain. However, optimizing sensory input is difficult due to the …
processing in the brain. However, optimizing sensory input is difficult due to the …
[HTML][HTML] Cell-type-specific inhibitory circuitry from a connectomic census of mouse visual cortex
Mammalian cortex features a large diversity of neuronal cell types, each with characteristic
anatomical, molecular and functional properties. Synaptic connectivity rules powerfully shape …
anatomical, molecular and functional properties. Synaptic connectivity rules powerfully shape …
[HTML][HTML] Activation of intracellular metabotropic glutamate receptor 5 in striatal neurons leads to up-regulation of genes associated with sustained synaptic …
The G-protein coupled receptor, metabotropic glutamate receptor 5 (mGluR5), is expressed
on both cell surface and intracellular membranes in striatal neurons. Using pharmacological …
on both cell surface and intracellular membranes in striatal neurons. Using pharmacological …
The visual cortex in context
E Froudarakis, PG Fahey, J Reimer… - Annual review of …, 2019 - annualreviews.org
In this article, we review the anatomical inputs and outputs to the mouse primary visual cortex,
area V1. Our survey of data from the Allen Institute Mouse Connectivity project indicates …
area V1. Our survey of data from the Allen Institute Mouse Connectivity project indicates …
Petascale neural circuit reconstruction: automated methods
3D electron microscopy (EM) has been successful at mapping invertebrate nervous systems,
but the approach has been limited to small chunks of mammalian brains. To scale up to …
but the approach has been limited to small chunks of mammalian brains. To scale up to …
Cell type composition and circuit organization of clonally related excitatory neurons in the juvenile mouse neocortex
Clones of excitatory neurons derived from a common progenitor have been proposed to serve
as elementary information processing modules in the neocortex. To characterize the cell …
as elementary information processing modules in the neocortex. To characterize the cell …
A rotation-equivariant convolutional neural network model of primary visual cortex
Classical models describe primary visual cortex (V1) as a filter bank of orientation-selective
linear-nonlinear (LN) or energy models, but these models fail to predict neural responses to …
linear-nonlinear (LN) or energy models, but these models fail to predict neural responses to …
The Sensorium competition on predicting large-scale mouse primary visual cortex activity
The neural underpinning of the biological visual system is challenging to study experimentally,
in particular as the neuronal activity becomes increasingly nonlinear with respect to …
in particular as the neuronal activity becomes increasingly nonlinear with respect to …
[HTML][HTML] Functional connectomics reveals general wiring rule in mouse visual cortex
Z Ding, PG Fahey, S Papadopoulos, EY Wang, B Celii… - bioRxiv, 2023 - ncbi.nlm.nih.gov
To understand how the brain computes, it is important to unravel the relationship between
circuit connectivity and function. Previous research has shown that excitatory neurons in layer …
circuit connectivity and function. Previous research has shown that excitatory neurons in layer …