User profiles for Pavel Merkulov

Pavel Merkulov

MIPT — Moscow Institute of Physics and Technology
Verified email at mipt.ru
Cited by 80

[HTML][HTML] Composition and Structure of Arabidopsis thaliana Extrachromosomal Circular DNAs Revealed by Nanopore Sequencing

P Merkulov, E Egorova, I Kirov - Plants, 2023 - mdpi.com
Extrachromosomal circular DNAs (eccDNAs) are enigmatic DNA molecules that have been
detected in a range of organisms. In plants, eccDNAs have various genomic origins and may …

[HTML][HTML] Nanopore RNA sequencing revealed long non-coding and LTR retrotransposon-related RNAs expressed at early stages of triticale SEED development

I Kirov, M Dudnikov, P Merkulov, A Shingaliev… - Plants, 2020 - mdpi.com
The intergenic space of plant genomes encodes many functionally important yet unexplored
RNAs. The genomic loci encoding these RNAs are often considered “junk”, DNA as they are …

Constitutional-legal and administrative-legal aspects of statutory regulation and maintenance of public security in the Russian Federation by the state and private …

AI Yastrebova, AI Stakhov, PA Merkulov… - J. Advanced Res. L. & …, 2017 - HeinOnline
The topicality of the researched problem is caused by the need for the rule-making and law-enforcement
activity of the Russian Federation and its constituent entities in the development …

[PDF][PDF] Transformation of national innovative systems: Russian and foreign experience

OA Stroeva, NV Mironenko, PA Merkulov… - Asian Social …, 2015 - researchgate.net
The article analyzes existing national innovative systems and their characteristics. The
authors allocate the preconditions for the formation of innovational system and determine the …

[HTML][HTML] Genomic and transcriptomic survey provides new insight into the organization and transposition activity of highly expressed LTR retrotransposons of …

I Kirov, M Omarov, P Merkulov, M Dudnikov… - International journal of …, 2020 - mdpi.com
LTR retrotransposons (RTEs) play a crucial role in plant genome evolution and adaptation.
Although RTEs are generally silenced in somatic plant tissues under non-stressed conditions…

[HTML][HTML] Transposons Hidden in Arabidopsis thaliana Genome Assembly Gaps and Mobilization of Non-Autonomous LTR Retrotransposons Unravelled by Nanotei …

I Kirov, P Merkulov, M Dudnikov, E Polkhovskaya… - Plants, 2021 - mdpi.com
Long-read data is a great tool to discover new active transposable elements (TEs). However,
no ready-to-use tools were available to gather this information from low coverage ONT …

[HTML][HTML] Epigenetic Stress and Long-Read cDNA Sequencing of Sunflower (Helianthus annuus L.) Revealed the Origin of the Plant Retrotranscriptome

I Kirov, P Merkulov, E Polkhovskaya, Z Konstantinov… - Plants, 2022 - mdpi.com
Transposable elements (TEs) contribute not only to genome diversity but also to transcriptome
diversity in plants. To unravel the sources of LTR retrotransposon (RTE) transcripts in …

[HTML][HTML] Functional Allium fistulosum centromeres comprise arrays of a long satellite repeat, insertions of retrotransposons and chloroplast DNA

…, M Omarov, S Gvaramiya, P Merkulov… - Frontiers in Plant …, 2020 - frontiersin.org
The centromere is a unique part of the chromosome combining a conserved function with
an extreme variability in its DNA sequence. Most of our knowledge about the functional …

[HTML][HTML] Searching for a needle in a haystack: Cas9-targeted Nanopore sequencing and DNA methylation profiling of full-length glutenin genes in a big cereal genome

I Kirov, E Polkhovskaya, M Dudnikov, P Merkulov… - Plants, 2021 - mdpi.com
Sequencing and epigenetic profiling of target genes in plants are important tasks with various
applications ranging from marker design for plant breeding to the study of gene expression …

[HTML][HTML] Nanopore Amplicon Sequencing Allows Rapid Identification of Glutenin Allelic Variants in a Wheat Collection

E Polkhovskaya, I Gruzdev, E Moskalev, P Merkulov… - Agronomy, 2023 - mdpi.com
Genetic variation in high molecular weight glutenin (HMW-GS) genes is tightly linked with
the breadmaking quality of wheat. Hundreds of different alleles have been identified in HMW-…