User profiles for Peter J Park
Peter J ParkHarvard Medical School Verified email at harvard.edu Cited by 134606 |
ChIP–seq: advantages and challenges of a maturing technology
PJ Park - Nature reviews genetics, 2009 - nature.com
Chromatin immunoprecipitation followed by sequencing (ChIP–seq) is a technique for
genome-wide profiling of DNA-binding proteins, histone modifications or nucleosomes. Owing to …
genome-wide profiling of DNA-binding proteins, histone modifications or nucleosomes. Owing to …
The 4D nucleome project
The 4D Nucleome Network aims to develop and apply approaches to map the structure and
dynamics of the human and mouse genomes in space and time with the goal of gaining …
dynamics of the human and mouse genomes in space and time with the goal of gaining …
Landscape of somatic retrotransposition in human cancers
Transposable elements (TEs) are abundant in the human genome, and some are capable
of generating new insertions through RNA intermediates. In cancer, the disruption of cellular …
of generating new insertions through RNA intermediates. In cancer, the disruption of cellular …
Somatic mutation in single human neurons tracks developmental and transcriptional history
Neurons live for decades in a postmitotic state, their genomes susceptible to DNA damage.
Here we survey the landscape of somatic single-nucleotide variants (SNVs) in the human …
Here we survey the landscape of somatic single-nucleotide variants (SNVs) in the human …
Hallmarks of pluripotency
Stem cells self-renew and generate specialized progeny through differentiation, but vary in
the range of cells and tissues they generate, a property called developmental potency. …
the range of cells and tissues they generate, a property called developmental potency. …
[PDF][PDF] Comprehensive characterization of cancer driver genes and mutations
…, C Suphavilai, JY Ko, E Khurana, PJ Park… - Cell, 2018 - cell.com
Identifying molecular cancer drivers is critical for precision oncology. Multiple advanced
algorithms to identify drivers now exist, but systematic attempts to combine and optimize them on …
algorithms to identify drivers now exist, but systematic attempts to combine and optimize them on …
Design and analysis of ChIP-seq experiments for DNA-binding proteins
Recent progress in massively parallel sequencing platforms has enabled genome-wide
characterization of DNA-associated proteins using the combination of chromatin …
characterization of DNA-associated proteins using the combination of chromatin …
An assessment of histone-modification antibody quality
We have tested the specificity and utility of more than 200 antibodies raised against 57 different
histone modifications in Drosophila melanogaster, Caenorhabditis elegans and human …
histone modifications in Drosophila melanogaster, Caenorhabditis elegans and human …
[HTML][HTML] The somatic genomic landscape of glioblastoma
We describe the landscape of somatic genomic alterations based on multidimensional and
comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify …
comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify …
[PDF][PDF] Integrated genomic characterization of papillary thyroid carcinoma
Papillary thyroid carcinoma (PTC) is the most common type of thyroid cancer. Here, we
describe the genomic landscape of 496 PTCs. We observed a low frequency of somatic …
describe the genomic landscape of 496 PTCs. We observed a low frequency of somatic …