User profiles for Peter Orchard

Peter Orchard

Pharmatics Ltd
Verified email at pharmaticsltd.com
Cited by 888

Genetic regulatory signatures underlying islet gene expression and type 2 diabetes

…, N Narisu, RDO Albanus, P Orchard… - Proceedings of the …, 2017 - National Acad Sciences
Genome-wide association studies (GWAS) have identified >100 independent SNPs that
modulate the risk of type 2 diabetes (T2D) and related traits. However, the pathogenic …

[HTML][HTML] Genetic variant effects on gene expression in human pancreatic islets and their implications for T2D

…, N Narisu, V Nylander, P Orchard… - Nature …, 2020 - nature.com
Most signals detected by genome-wide association studies map to non-coding sequence
and their tissue-specific effects influence transcriptional regulation. However, key tissues and …

[HTML][HTML] Glycosylation of plasma IgG in colorectal cancer prognosis

…, J Štambuk, M Pučić-Baković, F Vučković, P Orchard… - Scientific reports, 2016 - nature.com
In this study we demonstrate the potential value of Immunoglobulin G (IgG) glycosylation as
a novel prognostic biomarker of colorectal cancer (CRC). We analysed plasma IgG glycans …

[PDF][PDF] Quantification, dynamic visualization, and validation of bias in ATAC-seq data with ataqv

P Orchard, Y Kyono, J Hensley, JO Kitzman… - Cell systems, 2020 - cell.com
The assay for transposase-accessible chromatin using sequencing (ATAC-seq) has become
the preferred method for mapping chromatin accessibility due to its time and input material …

[PDF][PDF] Multiomic profiling identifies cis-regulatory networks underlying human pancreatic β cell identity and function

N Lawlor, EJ Marquez, P Orchard, N Narisu… - Cell reports, 2019 - cell.com
EndoC-βH1 is emerging as a critical human β cell model to study the genetic and
environmental etiologies of β cell (dys)function and diabetes. Comprehensive knowledge of its …

Anatomy of the bacitracin resistance network in Bacillus subtilis

J Radeck, S Gebhard, PS Orchard… - Molecular …, 2016 - Wiley Online Library
Protection against antimicrobial peptides (AMPs) often involves the parallel production of
multiple, well‐characterized resistance determinants. So far, little is known about how these …

Genome-wide association study of response to methotrexate in early rheumatoid arthritis patients

…, M Morgan, D Plant, M Colombo, P Orchard… - The …, 2018 - nature.com
Methotrexate (MTX) monotherapy is a common first treatment for rheumatoid arthritis (RA),
but many patients do not respond adequately. In order to identify genetic predictors of …

[HTML][HTML] Support, develop, empower: The co-development of a youth leadership framework

N Hornyak, P Patterson, P Orchard, KR Allison… - Children and Youth …, 2022 - Elsevier
Engaging young people in organisational leadership offers opportunities for them to contribute
and make a positive difference to their communities, benefitting both the young people …

[HTML][HTML] Improving prediction of risk of hospital admission in chronic obstructive pulmonary disease: application of machine learning to telemonitoring data

P Orchard, A Agakova, H Pinnock, CD Burton… - Journal of medical …, 2018 - jmir.org
Background Telemonitoring of symptoms and physiological signs has been suggested as a
means of early detection of chronic obstructive pulmonary disease (COPD) exacerbations, …

Human and rat skeletal muscle single-nuclei multi-omic integrative analyses nominate causal cell types, regulatory elements, and SNPs for complex traits

P Orchard, N Manickam, C Ventresca… - Genome …, 2021 - genome.cshlp.org
Skeletal muscle accounts for the largest proportion of human body mass, on average, and is
a key tissue in complex diseases and mobility. It is composed of several different cell and …