The importance of the digest: proteolysis and absolute quantification in proteomics
P Brownridge, RJ Beynon - Methods, 2011 - Elsevier
Virtually all mass spectrometric-based methods for quantitative proteomics are at the peptide
level, whether label-mediated or label-free. Absolute quantification in particular is based on …
level, whether label-mediated or label-free. Absolute quantification in particular is based on …
Strong anion exchange‐mediated phosphoproteomics reveals extensive human non‐canonical phosphorylation
G Hardman, S Perkins, PJ Brownridge, CJ Clarke… - The EMBO …, 2019 - embopress.org
Phosphorylation is a key regulator of protein function under (patho)physiological conditions,
and defining site‐specific phosphorylation is essential to understand basic and disease …
and defining site‐specific phosphorylation is essential to understand basic and disease …
[HTML][HTML] Characterising proteolysis during SARS-CoV-2 infection identifies viral cleavage sites and cellular targets with therapeutic potential
…, J Chiaravalli, S Gellenoncourt, P Brownridge… - Nature …, 2021 - nature.com
SARS-CoV-2 is the causative agent behind the COVID-19 pandemic, responsible for over
170 million infections, and over 3.7 million deaths worldwide. Efforts to test, treat and …
170 million infections, and over 3.7 million deaths worldwide. Efforts to test, treat and …
Global absolute quantification of a proteome: Challenges in the deployment of a QconCAT strategy
In this paper, we discuss the challenge of large‐scale quantification of a proteome, referring
to our programme that aims to define the absolute quantity, in copies per cell, of at least …
to our programme that aims to define the absolute quantity, in copies per cell, of at least …
Differential cysteine labeling and global label-free proteomics reveals an altered metabolic state in skeletal muscle aging
…, GK Sakellariou, NT Smith, P Brownridge… - Journal of proteome …, 2014 - ACS Publications
The molecular mechanisms underlying skeletal muscle aging and associated sarcopenia
have been linked to an altered oxidative status of redox-sensitive proteins. Reactive oxygen …
have been linked to an altered oxidative status of redox-sensitive proteins. Reactive oxygen …
[HTML][HTML] Probing the biogenesis pathway and dynamics of thylakoid membranes
…, T Ni, GF Dykes, DM Simpson, P Brownridge… - Nature …, 2021 - nature.com
How thylakoid membranes are generated to form a metabolically active membrane network
and how thylakoid membranes orchestrate the insertion and localization of protein …
and how thylakoid membranes orchestrate the insertion and localization of protein …
[HTML][HTML] Sperm competition risk drives plasticity in seminal fluid composition
…, DA Edward, AJ Claydon, DE Hammond, P Brownridge… - BMC biology, 2015 - Springer
Background Ejaculates contain a diverse mixture of sperm and seminal fluid proteins, the
combination of which is crucial to male reproductive success under competitive conditions. …
combination of which is crucial to male reproductive success under competitive conditions. …
[HTML][HTML] Direct and absolute quantification of over 1800 yeast proteins via selected reaction monitoring
Defining intracellular protein concentration is critical in molecular systems biology. Although
strategies for determining relative protein changes are available, defining robust absolute …
strategies for determining relative protein changes are available, defining robust absolute …
PEPPI-MS: Polyacrylamide-gel-based prefractionation for analysis of intact proteoforms and protein complexes by mass spectrometry
…, DS Butcher, VM Harman, P Brownridge… - Journal of proteome …, 2020 - ACS Publications
Prefractionation of complex mixtures of proteins derived from biological samples is
indispensable for proteome analysis via top-down mass spectrometry (MS). Polyacrylamide gel …
indispensable for proteome analysis via top-down mass spectrometry (MS). Polyacrylamide gel …
[HTML][HTML] Decoding the stoichiometric composition and organisation of bacterial metabolosomes
Some enteric bacteria including Salmonella have evolved the propanediol-utilising
microcompartment (Pdu MCP), a specialised proteinaceous organelle that is essential for 1,2-…
microcompartment (Pdu MCP), a specialised proteinaceous organelle that is essential for 1,2-…