User profiles for Pier F Palamara

Pier Francesco Palamara

University of Oxford
Verified email at broadinstitute.org
Cited by 6118

[HTML][HTML] Quantification of frequency-dependent genetic architectures in 25 UK Biobank traits reveals action of negative selection

…, S Gazal, LJ O'Connor, DJ Balick, PF Palamara… - Nature …, 2019 - nature.com
Understanding the role of rare variants is important in elucidating the genetic basis of human
disease. Negative selection can cause rare variants to have larger per-allele effect sizes …

North African Jewish and non-Jewish populations form distinctive, orthogonal clusters

CL Campbell, PF Palamara… - Proceedings of the …, 2012 - National Acad Sciences
North African Jews constitute the second largest Jewish Diaspora group. However, their
relatedness to each other; to European, Middle Eastern, and other Jewish Diaspora groups; and …

Reference-based phasing using the Haplotype Reference Consortium panel

PR Loh, P Danecek, PF Palamara, C Fuchsberger… - Nature …, 2016 - nature.com
Haplotype phasing is a fundamental problem in medical and population genetics. Phasing
is generally performed via statistical phasing in a genotyped cohort, an approach that can …

Linkage disequilibrium–dependent architecture of human complex traits shows action of negative selection

…, HK Finucane, NA Furlotte, PR Loh, PF Palamara… - Nature …, 2017 - nature.com
Recent work has hinted at the linkage disequilibrium (LD)-dependent architecture of human
complex traits, where SNPs with low levels of LD (LLD) have larger per-SNP heritability. …

[HTML][HTML] Biobank-scale inference of ancestral recombination graphs enables genealogical analysis of complex traits

…, ÁF Gunnarsson, F Cooper, PF Palamara - Nature Genetics, 2023 - nature.com
… a–f, We benchmark ARG inference performance for ARG-Needle, ASMC-clust, Relate,
tsinfer and a variation of tsinfer for sparse data (‘tsinfer-sparse’) in realistic CEU demography …

Fast and accurate long-range phasing in a UK Biobank cohort

PR Loh, PF Palamara, AL Price - Nature genetics, 2016 - nature.com
Recent work has leveraged the extensive genotyping of the Icelandic population to perform
long-range phasing (LRP), enabling accurate imputation and association analysis of rare …

Insights into clonal haematopoiesis from 8,342 mosaic chromosomal alterations

…, HK Finucane, YA Reshef, PF Palamara… - Nature, 2018 - nature.com
The selective pressures that shape clonal evolution in healthy individuals are largely unknown.
Here we investigate 8,342 mosaic chromosomal alterations, from 50 kb to 249 Mb long, …

[PDF][PDF] Length distributions of identity by descent reveal fine-scale demographic history

PF Palamara, T Lencz, A Darvasi, I Pe'er - The American journal of human …, 2012 - cell.com
Data-driven studies of identity by descent (IBD) were recently enabled by high-resolution
genomic data from large cohorts and scalable algorithms for IBD detection. Yet, haplotype …

[PDF][PDF] Abraham's children in the genome era: major Jewish diaspora populations comprise distinct genetic clusters with shared Middle Eastern Ancestry

…, I Pe'er, C Velez, A Pearlman, PF Palamara… - The American Journal of …, 2010 - cell.com
For more than a century, Jews and non-Jews alike have tried to define the relatedness of
contemporary Jewish people. Previous genetic studies of blood group and serum markers …

Quantification of frequency-dependent genetic architectures and action of negative selection in 25 UK Biobank traits

…, PR Loh, S Gazal, L O'Connor, DJ Balick, PF Palamara… - BioRxiv, 2017 - biorxiv.org
Understanding the role of rare variants is important in elucidating the genetic basis of human
diseases and complex traits. It is widely believed that negative selection can cause rare …