User profiles for Pranvera Hiseni
Pranvera HiseniPhD candidate Verified email at nmbu.no Cited by 58 |
[HTML][HTML] HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data
Background A major bottleneck in the use of metagenome sequencing for human gut
microbiome studies has been the lack of a comprehensive genome collection to be used as a …
microbiome studies has been the lack of a comprehensive genome collection to be used as a …
[HTML][HTML] Questioning the quality of 16S rRNA gene sequences derived from human gut metagenome-assembled genomes
The recent introduction of metagenome-assembled genomes (MAGs) has marked a major
milestone in the human gut microbiome field (Almeida et al., 2019; Nayfach et al., 2019; …
milestone in the human gut microbiome field (Almeida et al., 2019; Nayfach et al., 2019; …
Prediction of high fecal propionate-to-butyrate ratios using 16S rRNA-based detection of bacterial groups with liquid array diagnostics
Butyrate and propionate represent two of three main short-chain fatty acids produced by the
intestinal microbiota. In healthy populations, their levels are reportedly equimolar, whereas a …
intestinal microbiota. In healthy populations, their levels are reportedly equimolar, whereas a …
Liquid array diagnostics: a novel method for rapid detection of microbial communities in single-tube multiplex reactions
P Hiseni, RC Wilson, O Storrĝ, R Johnsen, T Ĝien… - …, 2019 - Future Science
We present a novel liquid array diagnostics (LAD) method, which enables rapid and inexpensive
detection of microbial markers in a single-tube multiplex reaction. We evaluated LAD …
detection of microbial markers in a single-tube multiplex reaction. We evaluated LAD …
[HTML][HTML] Development of Liquid Array Diagnostic (LAD) technology for prediction of human gut microbiota composition and functionality
P Hiseni - 2022 - nmbu.brage.unit.no
The microbial species residing in the human gut exercise vital functions for the host. They
produce different metabolites that are crucial for human wellbeing. A variety of such molecules …
produce different metabolites that are crucial for human wellbeing. A variety of such molecules …
HumGut: A comprehensive database of prokaryotic genomes in the healthy human gut
Genomics research has greatly increased understanding of the human gut microbiome, but
the existing reference databases remain insu cient, failing to map up to half of the sequences …
the existing reference databases remain insu cient, failing to map up to half of the sequences …
[HTML][HTML] Combining gene prediction methods to improve metagenomic gene annotation
NG Yok, GL Rosen - BMC bioinformatics, 2011 - Springer
Background Traditional gene annotation methods rely on characteristics that may not be
available in short reads generated from next generation technology, resulting in suboptimal …
available in short reads generated from next generation technology, resulting in suboptimal …
Detection of fungi with Liquid Array Diagnostics in dysbiotic patients
Z Gulczynska - 2019 - nmbu.brage.unit.no
… To Pranvera Hiseni, I can never thank you enough for all your help, time, patience and
engagement in this project. Our discussions have been priceless, as they always challenged my …
engagement in this project. Our discussions have been priceless, as they always challenged my …
Human Gut Microbiome: GA-map Coverage and Genomic Categories in Humgut
IAL Johansen - 2023 - nmbu.brage.unit.no
… I would also like to thank Pranvera Hiseni, co-supervisor from GA, for good conversations,
feedback, and guidance throughout the project. Additionally, thanks to the GA team for their …
feedback, and guidance throughout the project. Additionally, thanks to the GA team for their …
Phanta: Phage-inclusive profiling of human gut metagenomes
… We thank Dylan Maghini and Boryana Doyle for thoughtful comments on the manuscript,
Stephen Nayfach and Pranvera Hiseni for helpful conversations, Jakob Wirbel for testing Phanta…
Stephen Nayfach and Pranvera Hiseni for helpful conversations, Jakob Wirbel for testing Phanta…