User profiles for Pratip Chattopadhyay

Pratip K Chattopadhyay

Precision Immunology Laboratory, NYU Langone Health
Verified email at nyumc.org
Cited by 12902

Simultaneous epitope and transcriptome measurement in single cells

…, W Stephenson, B Houck-Loomis, PK Chattopadhyay… - Nature …, 2017 - nature.com
High-throughput single-cell RNA sequencing has transformed our understanding of complex
cell populations, but it does not provide phenotypic information such as cell-surface protein …

[HTML][HTML] Seventeen-colour flow cytometry: unravelling the immune system

SP Perfetto, PK Chattopadhyay… - Nature Reviews …, 2004 - nature.com
The increasing need for polychromatic approaches to flow cytometry, coupled with rapid
technological advances, has pushed the frontiers of flow cytometry beyond 12-colour systems. …

Guidelines for the use of flow cytometry and cell sorting in immunological studies

…, L Chatenoud, PK Chattopadhyay… - European journal of …, 2019 - Wiley Online Library
These guidelines are a consensus work of a considerable number of members of the
immunology and flow cytometry community. They provide the theory and key practical aspects of …

A deep profiler's guide to cytometry

…, GP Nolan, M Roederer, PK Chattopadhyay - Trends in …, 2012 - cell.com
In recent years, advances in technology have provided us with tools to quantify the expression
of multiple genes in individual cells. The ability to measure simultaneously multiple genes …

Guidelines for the use of flow cytometry and cell sorting in immunological studies*

…, X Cao, A Cavani, PK Chattopadhyay… - European journal of …, 2017 - Wiley Online Library
From a technical point of view a flow cytometer is a light detection device capable of detecting
photons of different wavelengths over a high dynamic range. In order to achieve a high …

Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry

PK Chattopadhyay, DA Price, TF Harper, MR Betts… - Nature medicine, 2006 - nature.com
Immune responses arise from a wide variety of cells expressing unique combinations of
multiple cell-surface proteins. Detailed characterization is hampered, however, by limitations in …

Single-cell technologies for monitoring immune systems

PK Chattopadhyay, TM Gierahn, M Roederer… - Nature …, 2014 - nature.com
The complex heterogeneity of cells, and their interconnectedness with each other, are major
challenges to identifying clinically relevant measurements that reflect the state and …

The size of the viral inoculum contributes to the outcome of hepatitis B virus infection

S Asabe, SF Wieland, PK Chattopadhyay… - Journal of …, 2009 - Am Soc Microbiol
The impact of virus dose on the outcome of infection is poorly understood. In this study we
show that, for hepatitis B virus (HBV), the size of the inoculum contributes to the kinetics of viral …

A live-cell assay to detect antigen-specific CD4+ T cells with diverse cytokine profiles

PK Chattopadhyay, J Yu, M Roederer - Nature medicine, 2005 - nature.com
Recently activated, but not resting, CD4 + T cells express CD154, providing costimulatory
signals to B cells and antigen-presenting cells (APCs). Therefore, de novo CD154 expression …

[HTML][HTML] Superior T memory stem cell persistence supports long-lived T cell memory

…, L Gattinoni, PK Chattopadhyay… - The Journal of …, 2013 - Am Soc Clin Investig
Long-lived memory T cells are able to persist in the host in the absence of antigen; however,
the mechanism by which they are maintained is not well understood. Recently, a subset of …