User profiles for Preyas Shah

Preyas Shah

10x Genomics, Stanford University
Verified email at alumni.stanford.edu
Cited by 2539

Direct determination of diploid genome sequences

NI Weisenfeld, V Kumar, P Shah, DM Church… - Genome …, 2017 - genome.cshlp.org
Determining the genome sequence of an organism is challenging, yet fundamental to
understanding its biology. Over the past decade, thousands of human genomes have been …

Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion

…, MR Mumbach, SE Pierce, MR Corces, P Shah… - Nature …, 2019 - nature.com
Understanding complex tissues requires single-cell deconstruction of gene regulation with
precision and scale. Here, we assess the performance of a massively parallel droplet-based …

Resolving the full spectrum of human genome variation using Linked-Reads

…, E Ruark, S Seal, M Schnall-Levin, P Shah… - Genome …, 2019 - genome.cshlp.org
Large-scale population analyses coupled with advances in technology have demonstrated
that the human genome is more diverse than originally thought. To date, this diversity has …

Dsagen: Synthesizing programmable spatial accelerators

J Weng, S Liu, V Dadu, Z Wang, P Shah… - 2020 ACM/IEEE 47th …, 2020 - ieeexplore.ieee.org
Domain-specific hardware accelerators can provide orders of magnitude speedup and
energy efficiency over general purpose processors. However, they require extensive manual …

Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library

…, S Ramakrishnan, V Kumar, P Shah… - Horticulture …, 2018 - academic.oup.com
Linked-Read sequencing technology has recently been employed successfully for de novo
assembly of human genomes, however, the utility of this technology for complex plant …

[HTML][HTML] Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data

Z Duren, WS Lu, JG Arthur, P Shah, J Xin… - Nature …, 2021 - nature.com
The comparison of gene regulatory networks between diseased versus healthy individuals
or between two different treatments is an important scientific problem. Here, we propose sc-…

The Mozart reuse exposed dataflow processor for AI and beyond: Industrial product

…, T Nowatzki, V Gangadhar, P Shah… - Proceedings of the 49th …, 2022 - dl.acm.org
In this paper we introduce the Mozart Processor, which implements a new processing
paradigm called Reuse Exposed Dataflow (RED). RED is a counterpart to existing execution …

[PDF][PDF] Extravasation of Brownian spheroidal nanoparticles through vascular pores

PN Shah, TY Lin, IL Aanei, SH Klass, BR Smith… - Biophysical journal, 2018 - cell.com
In modern cancer treatment, there is significant interest in studying the use of drug molecules
either directly injected into the bloodstream or delivered by nanoparticle (NP) carriers of …

Capacitive skin sensors for robot impact monitoring

S Phan, ZF Quek, P Shah, D Shin… - 2011 IEEE/RSJ …, 2011 - ieeexplore.ieee.org
A new generation of robots is being designed for human occupied workspaces where safety
is of great concern. This research demonstrates the use of a capacitive skin sensor for …

Improved de novo Genome Assembly: Linked-Read Sequencing Combined with Optical Mapping Produce a High Quality Mammalian Genome at Relatively Low …

DW Mohr, A Naguib, NI Weisenfeld, V Kumar, P Shah… - BioRxiv, 2017 - biorxiv.org
Current short-read methods have come to dominate genome sequencing because they are
cost-effective, rapid, and accurate. However, short reads are most applicable when data can …