User profiles for R. T. Raittz

Roberto Tadeu Raittz

SEPT - Universidade Federal do Paraná - UFPR
Verified email at ufpr.br
Cited by 831

[HTML][HTML] New tools in orthology analysis: a brief review of promising perspectives

BTL Nichio, JN Marchaukoski, RT Raittz - Frontiers in genetics, 2017 - frontiersin.org
Nowadays defying homology relationships among sequences is essential for biological
research. Within homology the analysis of orthologs sequences is of great importance for …

[HTML][HTML] Genome of Herbaspirillum seropedicae Strain SmR1, a Specialized Diazotrophic Endophyte of Tropical Grasses

…, C Glienke, S Karp, V Kava-Cordeiro, RT Raittz… - PLoS …, 2011 - journals.plos.org
The molecular mechanisms of plant recognition, colonization, and nutrient exchange between
diazotrophic endophytes and plants are scarcely known. Herbaspirillum seropedicae is …

[HTML][HTML] FGAP: an automated gap closing tool

…, MBR Steffens, FO Pedrosa, EM Souza, RT Raittz - BMC research …, 2014 - Springer
Background The fast reduction of prices of DNA sequencing allowed rapid accumulation of
genome data. However, the process of obtaining complete genome sequences is still very …

[HTML][HTML] GFinisher: a new strategy to refine and finish bacterial genome assemblies

D Guizelini, RT Raittz, LM Cruz, EM Souza… - Scientific reports, 2016 - nature.com
Despite the development in DNA sequencing technology, improving the number and the
length of reads, the process of reconstruction of complete genome sequences, the so called …

[HTML][HTML] Comparative analysis of genomic island prediction tools

AC da Silva Filho, RT Raittz, D Guizelini… - Frontiers in …, 2018 - frontiersin.org
Tools for genomic island prediction use strategies for genomic comparison analysis and
sequence composition analysis. The goal of comparative analysis is to identify unique regions …

[HTML][HTML] Comparative Genomics of Sibling Species of Fonsecaea Associated with Human Chromoblastomycosis

…, LF Moreno, FF Costa, RT Raittz… - Frontiers in …, 2017 - frontiersin.org
Fonsecaea and Cladophialophora are genera of black yeast-like fungi harboring agents of
a mutilating implantation disease in humans, along with strictly environmental species. The …

[HTML][HTML] Comparative genomics provides insights into the taxonomy of Azoarcus and reveals separate origins of nif genes in the proposed Azoarcus and Aromatoleum …

RT Raittz, C Reginatto De Pierri, M Maluk… - Genes, 2021 - mdpi.com
Among other attributes, the Betaproteobacterial genus Azoarcus has biotechnological
importance for plant growth-promotion and remediation of petroleum waste-polluted water and …

[HTML][HTML] Genome comparison between clinical and environmental strains of Herbaspirillum seropedicae reveals a potential new emerging bacterium adapted to …

…, D Camilios-Neto, LM Cruz, RT Raittz… - BMC genomics, 2019 - Springer
Background Herbaspirillum seropedicae is an environmental β-proteobacterium that is
capable of promoting the growth of economically relevant plants through biological nitrogen …

Dynamics of the Escherichia coli proteome in response to nitrogen starvation and entry into the stationary phase

…, FO Pedrosa, EM Souza, RT Raittz… - … et Biophysica Acta (BBA …, 2017 - Elsevier
Nitrogen is needed for the biosynthesis of biomolecules including proteins and nucleic acids.
In the absence of fixed nitrogen prokaryotes such as E. coli immediately ceases growth. …

[HTML][HTML] Environmental prospecting of black yeast-like agents of human disease using culture-independent methodology

…, MJ Najafzadeh, J Sun, RR Gomes, RT Raittz… - Scientific Reports, 2020 - nature.com
Melanized fungi and black yeasts in the family Herpotrichiellaceae (order Chaetothyriales)
are important agents of human and animal infectious diseases such as chromoblastomycosis …