User profiles for Rachael J Bloom
Rachael J BloomDuke University Verified email at duke.edu Cited by 328 |
[HTML][HTML] Dynamic linear models guide design and analysis of microbiota studies within artificial human guts
Background Artificial gut models provide unique opportunities to study human-associated
microbiota. Outstanding questions for these models’ fundamental biology include the …
microbiota. Outstanding questions for these models’ fundamental biology include the …
[HTML][HTML] Measuring and mitigating PCR bias in microbiota datasets
JD Silverman, RJ Bloom, S Jiang… - PLoS computational …, 2021 - journals.plos.org
PCR amplification plays an integral role in the measurement of mixed microbial communities
via high-throughput DNA sequencing of the 16S ribosomal RNA (rRNA) gene. Yet PCR is …
via high-throughput DNA sequencing of the 16S ribosomal RNA (rRNA) gene. Yet PCR is …
Interindividual variation in dietary carbohydrate metabolism by gut bacteria revealed with droplet microfluidic culture
Culture and screening of gut bacteria enable testing of microbial function and therapeutic
potential. However, the diversity of human gut microbial communities (microbiota) impedes …
potential. However, the diversity of human gut microbial communities (microbiota) impedes …
Identifying bipolar disorder susceptibility loci in a densely affected pedigree
Bipolar disorder (BIP) is a highly heritable disorder with complex patterns of genetic inheritance,
and recent genetic findings highlight the role of numerous common variants each with …
and recent genetic findings highlight the role of numerous common variants each with …
High-throughput isolation and culture of human gut bacteria with droplet microfluidics
Isolation and culture of gut bacteria enable testing for microbial roles in disease and may
also lead to novel therapeutics. However, the diversity of human gut microbial communities (…
also lead to novel therapeutics. However, the diversity of human gut microbial communities (…
Comprehensive analysis of copy number variation in monozygotic twins discordant for bipolar disorder or schizophrenia
Copy number variation plays a clear role in the etiology of many psychiatric disorders,
particularly schizophrenia. We performed array-CGH to look for copy number variants between …
particularly schizophrenia. We performed array-CGH to look for copy number variants between …
Measuring and mitigating PCR bias in microbiome data
JD Silverman, RJ Bloom, S Jiang, HK Durand… - BioRxiv, 2019 - biorxiv.org
PCR amplification plays a central role in the measurement of mixed microbial communities
via high-throughput sequencing. Yet PCR is also known to be a common source of bias in …
via high-throughput sequencing. Yet PCR is also known to be a common source of bias in …
[PDF][PDF] Sullivan Lab
We applied multiple complementary genomic technologies to this pedigree including SNP
genotyping using the Illumina OMNI 1M chip, high density copy number variant mapping …
genotyping using the Illumina OMNI 1M chip, high density copy number variant mapping …
[PDF][PDF] High-throughput isolation and culture of human gut bacteria with droplet microfluidics
RJ Bloom - 2019 - dukespace.lib.duke.edu
The hundreds of microbes that inhabit the human gut play a large role in human health and
disease. The ability to isolate and culture bacteria from within the human gut allows us to …
disease. The ability to isolate and culture bacteria from within the human gut allows us to …
Major Adjustment: Undergraduates' Transition Experiences When Leaving Selective Degree Programs
HM Halasz, JL Bloom - NACADA Journal, 2019 - meridian.allenpress.com
More than 80% of college students switch degree programs, and students in selective majors,
such as business and nursing, often face complex processes with serious implications …
such as business and nursing, often face complex processes with serious implications …