User profiles for Ralf Eggeling

Ralf Eggeling

University of Tübingen
Verified email at informatik.uni-tuebingen.de
Cited by 640

[PDF][PDF] Kinetics and correlates of the neutralizing antibody response to SARS-CoV-2 infection in humans

…, B Gathof, G Fätkenheuer, N Pfeifer, R Eggeling… - Cell host & …, 2021 - cell.com
Understanding antibody-based SARS-CoV-2 immunity is critical for overcoming the COVID-19
pandemic and informing vaccination strategies. We evaluated SARS-CoV-2 antibody …

Polyclonal and convergent antibody response to Ebola virus vaccine rVSV-ZEBOV

…, P Schommers, L Gieselmann, R Eggeling… - Nature medicine, 2019 - nature.com
Recombinant vesicular stomatitis virus–Zaire Ebola virus (rVSV-ZEBOV) is the most advanced
Ebola virus vaccine candidate and is currently being used to combat the outbreak of …

[HTML][HTML] Learning Bayesian networks with local structure, mixed variables, and exact algorithms

T Talvitie, R Eggeling, M Koivisto - International Journal of Approximate …, 2019 - Elsevier
Modern exact algorithms for structure learning in Bayesian networks first compute an exact
local score of every candidate parent set, and then find a network structure by combinatorial …

[HTML][HTML] Dynamics and durability of HIV-1 neutralization are determined by viral replication

…, DS Kim, M Schlotz, C Kreer, R Eggeling… - Nature Medicine, 2023 - nature.com
Human immunodeficiency virus type 1 (HIV-1)-neutralizing antibodies (nAbs) that prevent
infection are the main goal of HIV vaccine discovery. But as no nAb-eliciting vaccines are yet …

[HTML][HTML] Inferring intra-motif dependencies of DNA binding sites from ChIP-seq data

R Eggeling, T Roos, P Myllymäki, I Grosse - BMC bioinformatics, 2015 - Springer
Background Statistical modeling of transcription factor binding sites is one of the classical
fields in bioinformatics. The position weight matrix (PWM) model, which assumes statistical …

Evaluation of a rapid antigen test to detect SARS-CoV-2 infection and identify potentially infectious individuals

…, M Madler, K Vanshylla, R Eggeling… - Journal of clinical …, 2021 - Am Soc Microbiol
The identification and isolation of highly infectious SARS-CoV-2-infected individuals is an
important public health strategy. Rapid antigen detection tests (RADT) are promising tools for …

Durability of omicron-neutralising serum activity after mRNA booster immunisation in older adults

…, P Tober-Lau, H Gruell, F Münn, R Eggeling… - The Lancet Infectious …, 2022 - thelancet.com
Advanced age is a key risk factor for morbidity and mortality asso ciated with SARS-CoV-2
infection. Therefore, older adults have generally been prioritised for COVID-19 vaccination. …

[HTML][HTML] On the value of intra-motif dependencies of human insulator protein CTCF

R Eggeling, A Gohr, J Keilwagen, M Mohr, S Posch… - PLoS …, 2014 - journals.plos.org
The binding affinity of DNA-binding proteins such as transcription factors is mainly determined
by the base composition of the corresponding binding site on the DNA strand. Most …

Disentangling transcription factor binding site complexity

R Eggeling - Nucleic acids research, 2018 - academic.oup.com
The binding motifs of many transcription factors (TFs) comprise a higher degree of complexity
than a single position weight matrix model permits. Additional complexity is typically taken …

InMoDe: tools for learning and visualizing intra-motif dependencies of DNA binding sites

R Eggeling, I Grosse, J Grau - Bioinformatics, 2017 - academic.oup.com
Recent studies have shown that the traditional position weight matrix model is often
insufficient for modeling transcription factor binding sites, as intra-motif dependencies play a …