User profiles for Ramneek Gupta

Ramneek Gupta

Technical University of Denmark
Verified email at cbs.dtu.dk
Cited by 16859

Prediction of post‐translational glycosylation and phosphorylation of proteins from the amino acid sequence

N Blom, T Sicheritz‐Pontén, R Gupta… - …, 2004 - Wiley Online Library
Post‐translational modifications (PTMs) occur on almost all proteins analyzed to date. The
function of a modified protein is often strongly affected by these modifications and therefore …

Precision mapping of the human O‐GalNAc glycoproteome through SimpleCell technology

…, NB Pedersen, L Marcos‐Silva, R Gupta… - The EMBO …, 2013 - embopress.org
Glycosylation is the most abundant and diverse posttranslational modification of proteins.
While several types of glycosylation can be predicted by the protein sequence context, and …

Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites

K Julenius, A Mølgaard, R Gupta, S Brunak - Glycobiology, 2005 - academic.oup.com
O-GalNAc-glycosylation is one of the main types of glycosylation in mammalian cells. No
consensus recognition sequence for the O-glycosyltransferases is known, making prediction …

Prediction of glycosylation across the human proteome and the correlation to protein function

R Gupta, S Brunak - Biocomputing 2002, 2001 - World Scientific
Prediction of glycosylation across the human proteome and the correlation to protein
function Ramneek Gupta and S0ren Brunak Cen … Ramneek Gupta and S0ren Brunak …

[HTML][HTML] Ancient human genome sequence of an extinct Palaeo-Eskimo

…, I Moltke, M Metspalu, E Metspalu, T Kivisild, R Gupta… - Nature, 2010 - nature.com
We report here the genome sequence of an ancient human. Obtained from ∼4,000-year-old
permafrost-preserved hair, the genome represents a male individual from the first known …

Analysis and prediction of leucine-rich nuclear export signals

…, L Kiemer, A Mølgaard, R Gupta… - Protein Engineering …, 2004 - academic.oup.com
We present a thorough analysis of nuclear export signals and a prediction server, which we
have made publicly available. The machine learning prediction method is a significant …

An Aboriginal Australian genome reveals separate human dispersals into Asia

…, O Nehlich, M Bunce, M Richards, R Gupta… - Science, 2011 - science.org
We present an Aboriginal Australian genomic sequence obtained from a 100-year-old lock
of hair donated by an Aboriginal man from southern Western Australia in the early 20th …

A genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations

…, L Duijts, A Custovic, DE Davies, D Torrents, R Gupta… - Nature …, 2014 - nature.com
Asthma exacerbations are among the most frequent causes of hospitalization during
childhood, but the underlying mechanisms are poorly understood. We performed a genome-wide …

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

…, M Collins, L Orlando, F Balloux, A Manica, R Gupta… - Nature, 2014 - nature.com
Clovis, with its distinctive biface, blade and osseous technologies, is the oldest widespread
archaeological complex defined in North America, dating from 11,100 to 10,700 14 C years …

Prediction of human protein function from post-translational modifications and localization features

LJ Jensen, R Gupta, N Blom, D Devos… - Journal of molecular …, 2002 - Elsevier
We have developed an entirely sequence-based method that identifies and integrates relevant
features that can be used to assign proteins of unknown function to functional classes, …