User profiles for Richard E. Spinney
 | Richard SpinneyUniversity of New South Wales Verified email at unsw.edu.au Cited by 1039 |
Entropy production in full phase space for continuous stochastic dynamics
RE Spinney, IJ Ford - Physical Review E, 2012 - APS
Total entropy production and its three constituent components are described both as
fluctuating trajectory-dependent quantities and as averaged contributions in the context of the …
fluctuating trajectory-dependent quantities and as averaged contributions in the context of the …
Nonequilibrium thermodynamics of stochastic systems with odd and even variables
RE Spinney, IJ Ford - Physical review letters, 2012 - APS
The total entropy production of stochastic systems can be divided into three quantities. The
first corresponds to the excess heat, while the second two comprise the housekeeping heat. …
first corresponds to the excess heat, while the second two comprise the housekeeping heat. …
Transfer entropy in continuous time, with applications to jump and neural spiking processes
Transfer entropy has been used to quantify the directed flow of information between source
and target variables in many complex systems. While transfer entropy was originally …
and target variables in many complex systems. While transfer entropy was originally …
[HTML][HTML] Estimating transfer entropy in continuous time between neural spike trains or other event-based data
Transfer entropy (TE) is a widely used measure of directed information flows in a number of
domains including neuroscience. Many real-world time series for which we are interested in …
domains including neuroscience. Many real-world time series for which we are interested in …
The stability and number of nucleating interactions determine DNA hybridization rates in the absence of secondary structure
S Hertel, RE Spinney, SY Xu, TE Ouldridge… - Nucleic Acids …, 2022 - academic.oup.com
The kinetics of DNA hybridization are fundamental to biological processes and DNA-based
technologies. However, the precise physical mechanisms that determine why different DNA …
technologies. However, the precise physical mechanisms that determine why different DNA …
Irreversibility and emergent structure in active matter
Active matter is rapidly becoming a key paradigm of out-of-equilibrium soft matter exhibiting
complex collective phenomena, yet the thermodynamics of such systems remain poorly …
complex collective phenomena, yet the thermodynamics of such systems remain poorly …
Fluctuation relations: A pedagogical overview
RE Spinney, IJ Ford - arXiv preprint arXiv:1201.6381, 2012 - arxiv.org
The fluctuation relations have received considerable attention since their emergence and
development in the 1990s. We present a summary of the main results and suggest ways to …
development in the 1990s. We present a summary of the main results and suggest ways to …
[HTML][HTML] Population mobility induced phase separation in SIS epidemic and social dynamics
N Harding, RE Spinney, M Prokopenko - Scientific reports, 2020 - nature.com
Understanding the impact of behavior dependent mobility in the spread of epidemics and
social disorders is an outstanding problem in computational epidemiology. We present a …
social disorders is an outstanding problem in computational epidemiology. We present a …
Thermodynamics and computation during collective motion near criticality
We study self-organization of collective motion as a thermodynamic phenomenon in the
context of the first law of thermodynamics. It is expected that the coherent ordered motion …
context of the first law of thermodynamics. It is expected that the coherent ordered motion …
Transfer entropy in physical systems and the arrow of time
Recent developments have cemented the realization that many concepts and quantities in
thermodynamics and information theory are shared. In this paper, we consider a highly …
thermodynamics and information theory are shared. In this paper, we consider a highly …