[PDF][PDF] Fold change of nuclear NF-κB determines TNF-induced transcription in single cells

REC Lee, SR Walker, K Savery, DA Frank, S Gaudet - Molecular cell, 2014 - cell.com
In response to tumor necrosis factor (TNF), NF-κB enters the nucleus and promotes inflammatory
and stress-responsive gene transcription. Because NF-κB deregulation is associated …

Metacaspase Yca1 is required for clearance of insoluble protein aggregates

REC Lee, S Brunette, LG Puente… - Proceedings of the …, 2010 - National Acad Sciences
In complex organisms, caspase proteases mediate a variety of cell behaviors, including
proliferation, differentiation, and programmed cell death/apoptosis. Structural homologs to the …

Demystifying the cytokine network: Mathematical models point the way

PA Morel, REC Lee, JR Faeder - Cytokine, 2017 - Elsevier
Cytokines provide the means by which immune cells communicate with each other and with
parenchymal cells. There are over one hundred cytokines and many exist in families that …

[HTML][HTML] A non-death role of the yeast metacaspase: Yca1p alters cell cycle dynamics

REC Lee, LG Puente, M Kærn, LA Megeney - PloS one, 2008 - journals.plos.org
Caspase proteases are a conserved protein family predominantly known for engaging and
executing apoptotic cell death. Nevertheless, in higher eukaryotes, caspases also influence a …

[PDF][PDF] NF-κB dynamics discriminate between TNF doses in single cells

…, GJ Kowalczyk, AE Mancini, JR Faeder, REC Lee - Cell systems, 2017 - cell.com
Although cytokine-dependent dynamics of nuclear factor κB (NF-κB) are known to encode
information that regulates cell fate decisions, it is unclear whether single-cell responses are …

[HTML][HTML] NF-κB signalling and cell fate decisions in response to a short pulse of tumour necrosis factor

REC Lee, MA Qasaimeh, X Xia, D Juncker… - Scientific Reports, 2016 - nature.com
In tissues and tumours, cell behaviours are regulated by multiple time-varying signals. While
in the laboratory cells are often exposed to a stimulus for the duration of the experiment, in …

[PDF][PDF] NF-κB-chromatin interactions drive diverse phenotypes by modulating transcriptional noise

VC Wong, VL Bass, ME Bullock, AK Chavali, REC Lee… - Cell reports, 2018 - cell.com
Noisy gene expression generates diverse phenotypes, but little is known about mechanisms
that modulate noise. Combining experiments and modeling, we studied how tumor necrosis …

[HTML][HTML] A novel whole-cell lysate kinase assay identifies substrates of the p38 MAPK in differentiating myoblasts

JDR Knight, R Tian, REC Lee, F Wang, A Beauvais… - Skeletal muscle, 2012 - Springer
Background The p38α mitogen-activated protein kinase (MAPK) is a critical mediator of
myoblast differentiation, and does so in part through the phosphorylation and regulation of …

[HTML][HTML] A network-centric approach to drugging TNF-induced NF-κB signaling

…, JA Cruz, DL Schipper, CJ Camacho, REC Lee - Nature …, 2019 - nature.com
Target-centric drug development strategies prioritize single-target potency in vitro and do not
account for connectivity and multi-target effects within a signal transduction network. Here, …

A variable-gain stochastic pooling motif mediates information transfer from receptor assemblies into NF-κB

…, S Gupta, DL Schipper, SW Smeal, REC Lee - Science …, 2021 - science.org
A myriad of inflammatory cytokines regulate signaling pathways to maintain cellular homeostasis.
The IκB kinase (IKK) complex is an integration hub for cytokines that govern nuclear …