The Clustal W and Clustal X multiple sequence alignment programs have been completely
rewritten in C++. This will facilitate the further development of the alignment algorithms in the …

Multiple sequence alignments are fundamental to many sequence analysis methods. Most
alignments are computed using the progressive alignment heuristic. These methods are …

Motivation: Robust large-scale sequence analysis is a major challenge in modern genomic
science, where biologists are frequently trying to characterize many millions of sequences. …

The Clustal series of programs are widely used in molecular biology for the multiple alignment
of both nucleic acid and protein sequences and for preparing phylogenetic trees. The …

The EMBL-EBI provides free access to popular bioinformatics sequence analysis applications
as well as to a full-featured text search engine with powerful cross-referencing and data …

The EMBL-EBI search and sequence analysis tools frameworks provide integrated access
to EMBL-EBI’s data resources and core bioinformatics analytical tools. EBI Search ( https://…

To provide the scientific community with a single, centralized, authoritative resource for protein
sequences and functional information, the Swiss‐Prot, TrEMBL and PIR protein database …

InterProScan [EM Zdobnov and R. Apweiler (2001) Bioinformatics , 17, 847–848] is a tool that
combines different protein signature recognition methods from the InterPro [NJ Mulder, R. …

The EMBL-EBI provides access to various mainstream sequence analysis applications.
These include sequence similarity search services such as BLAST, FASTA, InterProScan and …

… Rodrigo Lopez , Rodrigo Lopez … Barker, Brigitte Boeckmann, Serenella Ferro, Elisabeth
Gasteiger, Hongzhan Huang, Rodrigo Lopez, Michele Magrane, Maria J. Martin, Darren A. Natale…