User profiles for Ronen Berkovich

Ronen Berkovich

Ben-Gurion University
Verified email at bgu.ac.il
Cited by 751

Nanomechanics of HaloTag tethers

I Popa, R Berkovich, J Alegre-Cebollada… - Journal of the …, 2013 - ACS Publications
The active site of the Haloalkane Dehydrogenase (HaloTag) enzyme can be covalently
attached to a chloroalkane ligand providing a mechanically strong tether, resistant to large …

Single molecule force spectroscopy and molecular dynamics simulations as a combined platform for probing protein face-specific binding

…, S Banerjee, S Parimal, L Sejergaard, R Berkovich… - Langmuir, 2017 - ACS Publications
Biomolecular interactions frequently occur in orientation-specific manner. For example, prior
nuclear magnetic resonance spectroscopy experiments in our lab have suggested the …

Probing the effect of force on HIV-1 receptor CD4

R Perez-Jimenez, A Alonso-Caballero, R Berkovich… - ACS …, 2014 - ACS Publications
Cell-surface proteins are central for the interaction of cells with their surroundings and are
also associated with numerous diseases. These molecules are exposed to mechanical forces, …

[PDF][PDF] Collapse dynamics of single proteins extended by force

R Berkovich, S Garcia-Manyes, M Urbakh, J Klafter… - Biophysical journal, 2010 - cell.com
Single-molecule force spectroscopy has opened up new approaches to the study of protein
dynamics. For example, an extended protein folding after an abrupt quench in the pulling …

Rate limit of protein elastic response is tether dependent

R Berkovich, RI Hermans, I Popa… - Proceedings of the …, 2012 - National Acad Sciences
The elastic restoring force of tissues must be able to operate over the very wide range of
loading rates experienced by living organisms. It is surprising that even the fastest events …

An inside look at a biofilm: Pseudomonas aeruginosa flagella biotracking

…, E Chetrit, A Boyarski, MM Meijler, R Berkovich… - Science …, 2021 - science.org
The opportunistic pathogen, Pseudomonas aeruginosa, a flagellated bacterium, is one of
the top model organisms for biofilm studies. To elucidate the location of bacterial flagella …

Hopping around an entropic barrier created by force

R Berkovich, S Garcia-Manyes, J Klafter… - Biochemical and …, 2010 - Elsevier
We use Langevin dynamics to investigate the role played by the recently discovered force-induced
entropic energy barrier on the two-state hopping phenomena that has been observed …

Physical and antimicrobial properties of chitosan/silver nanoparticle composite hydrogels: role of the crosslinker

…, E Nativ-Roth, A Kushmaro, R Berkovich… - ACS Sustainable …, 2022 - ACS Publications
Chitosan hydrogels have widespread industrial applications due to their versatility and
antimicrobial potential. However, their applicability can be limited by poor mechanical properties …

Segmentation and the entropic elasticity of modular proteins

R Berkovich, VI Fernandez, G Stirnemann… - The journal of …, 2018 - ACS Publications
Single-molecule force spectroscopy utilizes polyproteins, which are composed of tandem
modular domains, to study their mechanical and structural properties. Under the application of …

[HTML][HTML] Reversible two-state folding of the ultrafast protein gpW under mechanical force

J Schönfelder, D De Sancho, R Berkovich… - Communications …, 2018 - nature.com
Ultrafast folding proteins have limited cooperativity and thus are excellent models to resolve,
via single-molecule experiments, the fleeting molecular events that proteins undergo during …