Single-cell transcriptomics to explore the immune system in health and disease

MJT Stubbington, O Rozenblatt-Rosen, A Regev… - Science, 2017 - science.org
The immune system varies in cell types, states, and locations. The complex networks,
interactions, and responses of immune cells produce diverse cellular ecosystems composed of …

[PDF][PDF] The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution

O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy… - Cell, 2020 - cell.com
Crucial transitions in cancer—including tumor initiation, local expansion, metastasis, and
therapeutic resistance—involve complex interactions between cells within the dynamic tumor …

[HTML][HTML] A roadmap for the human developmental cell atlas

…, D Pe'er, A Regev, J Rood, O Rozenblatt-Rosen… - Nature, 2021 - nature.com
The Human Developmental Cell Atlas (HDCA) initiative, which is part of the Human Cell Atlas,
aims to create a comprehensive reference map of cells during development. This will be …

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma

…, WT Curry, RL Martuza, DN Louis, O Rozenblatt-Rosen… - Science, 2014 - science.org
Human cancers are complex ecosystems composed of cells with distinct phenotypes, genotypes,
and epigenetic states, but current models do not adequately reflect tumor composition …

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

…, J Jané-Valbuena, CH Yoon, O Rozenblatt-Rosen… - Science, 2016 - science.org
To explore the distinct genotypic and phenotypic states of melanoma tumors, we applied
single-cell RNA sequencing (RNA-seq) to 4645 single cells isolated from 19 patients, profiling …

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

…, A Filby, W Li, PL De Jager, O Rozenblatt-Rosen… - Science, 2017 - science.org
INTRODUCTION Dendritic cells (DCs) and monocytes consist of multiple specialized
subtypes that play a central role in pathogen sensing, phagocytosis, and antigen presentation. …

The human cell atlas

…, CP Ponting, S Quake, W Reik, O Rozenblatt-Rosen… - elife, 2017 - elifesciences.org
10.7554/eLife.27041.001 The recent advent of methods for high-throughput single-cell
molecular profiling has catalyzed a growing sense in the scientific community that the time is ripe …

[HTML][HTML] COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

…, B Li, AK Shalek, AC Villani, O Rozenblatt-Rosen… - Nature, 2021 - nature.com
COVID-19, which is caused by SARS-CoV-2, can result in acute respiratory distress syndrome
and multiple organ failure 1 , 2 , 3 – 4 , but little is known about its pathophysiology. Here …

[PDF][PDF] Single-cell transcriptomic analysis of primary and metastatic tumor ecosystems in head and neck cancer

…, MA Varvares, R Mylvaganam, O Rozenblatt-Rosen… - Cell, 2017 - cell.com
The diverse malignant, stromal, and immune cells in tumors affect growth, metastasis, and
response to therapy. We profiled transcriptomes of ∼6,000 single cells from 18 head and …

[PDF][PDF] An integrative model of cellular states, plasticity, and genetics for glioblastoma

…, N Riggi, E Rheinbay, M Monje, O Rozenblatt-Rosen… - Cell, 2019 - cell.com
Diverse genetic, epigenetic, and developmental programs drive glioblastoma, an incurable
and poorly understood tumor, but their precise characterization remains challenging. Here, …