User profiles for Rune Linding

Dr. Rune Linding

Humboldt-Universität zu Berlin
Verified email at hu-berlin.de
Cited by 13510

Navigating cancer network attractors for tumor-specific therapy

P Creixell, EM Schoof, JT Erler, R Linding - Nature biotechnology, 2012 - nature.com
Cells employ highly dynamic signaling networks to drive biological decision processes.
Perturbations to these signaling networks may attract cells to new malignant signaling and …

[PDF][PDF] Protein disorder prediction: implications for structural proteomics

R Linding, LJ Jensen, F Diella, P Bork, TJ Gibson… - Structure, 2003 - cell.com
A great challenge in the proteomics and structural genomics era is to predict protein
structure and function, including identification of those proteins that are partially or wholly …

[HTML][HTML] Network medicine

T Pawson, R Linding - FEBS letters, 2008 - Elsevier
To more effectively target complex diseases like cancer, diabetes and schizophrenia, we may
need to rethink our strategies for drug development and the selection of molecular targets …

Normalization of nomenclature for peptide motifs as ligands of modular protein domains

…, T Jarchau, VP Lehto, MA Lemmon, R Linding… - FEBS …, 2002 - Wiley Online Library
We propose a normalization of symbols and terms used to describe, accurately and succinctly,
the detailed interactions between amino acid residues of pairs of interacting proteins at …

GlobPlot: Exploring protein sequences for globularity and disorder

R Linding, RB Russell, V Neduva… - Nucleic acids …, 2003 - academic.oup.com
A major challenge in the proteomics and structural genomics era is to predict protein
structure and function, including identification of those proteins that are partially or wholly …

[HTML][HTML] Systematic discovery of in vivo phosphorylation networks

R Linding, LJ Jensen, GJ Ostheimer, MATM van Vugt… - Cell, 2007 - cell.com
Protein kinases control cellular decision processes by phosphorylating specific substrates.
Thousands of in vivo phosphorylation sites have been identified, mostly by proteome-wide …

Dynamic modularity in protein interaction networks predicts breast cancer outcome

IW Taylor, R Linding, D Warde-Farley, Y Liu… - Nature …, 2009 - nature.com
Abstract Changes in the biochemical wiring of oncogenic cells drives phenotypic transformations
that directly affect disease outcome. Here we examine the dynamic structure of the …

[HTML][HTML] An atlas of substrate specificities for the human serine/threonine kinome

…, J Lu, SD Landry, B Zhang, I Cossentino, R Linding… - Nature, 2023 - nature.com
Protein phosphorylation is one of the most widespread post-translational modifications in
biology 1 , 2 . With advances in mass-spectrometry-based phosphoproteomics, 90,000 sites of …

ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins

P Puntervoll, R Linding, C Gemund… - Nucleic acids …, 2003 - academic.oup.com
Multidomain proteins predominate in eukaryotic proteomes. Individual functions assigned to
different sequence segments combine to create a complex function for the whole protein. …

RETRACTED ARTICLE: The hypoxic cancer secretome induces pre-metastatic bone lesions through lysyl oxidase

…, H Forrest, HR Evans, ID Huggins, G Lang, R Linding… - Nature, 2015 - nature.com
Tumour metastasis is a complex process involving reciprocal interplay between cancer cells
and host stroma at both primary and secondary sites, and is strongly influenced by …