User profiles for Ruth E Hanna
Ruth E HannaPhD student, MIT Biology Verified email at mit.edu Cited by 1839 |
[PDF][PDF] Genome-wide CRISPR screens reveal host factors critical for SARS-CoV-2 infection
Identification of host genes essential for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
infection may reveal novel therapeutic targets and inform our understanding of …
infection may reveal novel therapeutic targets and inform our understanding of …
[HTML][HTML] Optimized libraries for CRISPR-Cas9 genetic screens with multiple modalities
The creation of genome-wide libraries for CRISPR knockout (CRISPRko), interference (CRISPRi),
and activation (CRISPRa) has enabled the systematic interrogation of gene function. …
and activation (CRISPRa) has enabled the systematic interrogation of gene function. …
[PDF][PDF] Massively parallel assessment of human variants with base editor screens
Understanding the functional consequences of single-nucleotide variants is critical to
uncovering the genetic underpinnings of diseases, but technologies to characterize variants are …
uncovering the genetic underpinnings of diseases, but technologies to characterize variants are …
[HTML][HTML] Pharmacological disruption of mSWI/SNF complex activity restricts SARS-CoV-2 infection
Identification of host determinants of coronavirus infection informs mechanisms of viral
pathogenesis and can provide new drug targets. Here we demonstrate that mammalian SWItch/…
pathogenesis and can provide new drug targets. Here we demonstrate that mammalian SWItch/…
Design and analysis of CRISPR–Cas experiments
A large and ever-expanding set of CRISPR–Cas systems now enables the rapid and
flexible manipulation of genomes in both targeted and large-scale experiments. Numerous …
flexible manipulation of genomes in both targeted and large-scale experiments. Numerous …
Optimization of AsCas12a for combinatorial genetic screens in human cells
Cas12a RNA-guided endonucleases are promising tools for multiplexed genetic perturbations
because they can process multiple guide RNAs expressed as a single transcript, and …
because they can process multiple guide RNAs expressed as a single transcript, and …
[HTML][HTML] Genetic screens in isogenic mammalian cell lines without single cell cloning
Isogenic pairs of cell lines, which differ by a single genetic modification, are powerful tools for
understanding gene function. Generating such pairs of mammalian cells, however, is labor-…
understanding gene function. Generating such pairs of mammalian cells, however, is labor-…
[HTML][HTML] Genome-wide CRISPR screen reveals host genes that regulate SARS-CoV-2 infection
Identification of host genes essential for SARS-CoV-2 infection may reveal novel therapeutic
targets and inform our understanding of COVID-19 pathogenesis. Here we performed a …
targets and inform our understanding of COVID-19 pathogenesis. Here we performed a …
[HTML][HTML] Benchmarking of SpCas9 variants enables deeper base editor screens of BRCA1 and BCL2
Numerous rationally-designed and directed-evolution variants of SpCas9 have been reported
to expand the utility of CRISPR technology. Here, we assess the activity and specificity of …
to expand the utility of CRISPR technology. Here, we assess the activity and specificity of …
[HTML][HTML] DYRK1A promotes viral entry of highly pathogenic human coronaviruses in a kinase-independent manner
…, CK Collings, PC DeWeirdt, RE Hanna… - PLoS …, 2023 - journals.plos.org
Identifying host genes essential for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)
has the potential to reveal novel drug targets and further our understanding of …
has the potential to reveal novel drug targets and further our understanding of …