Pfam: the protein families database

…, J Clements, P Coggill, RY Eberhardt… - Nucleic acids …, 2014 - academic.oup.com
Pfam, available via servers in the UK ( http://pfam.sanger.ac.uk/ ) and the USA ( http://pfam.janelia.org/
), is a widely used database of protein families, containing 14 831 manually …

The Pfam protein families database: towards a more sustainable future

RD Finn, P Coggill, RY Eberhardt, SR Eddy… - Nucleic acids …, 2016 - academic.oup.com
In the last two years the Pfam database ( http://pfam.xfam.org ) has undergone a substantial
reorganisation to reduce the effort involved in making a release, thereby permitting more …

The Pfam protein families database

M Punta, PC Coggill, RY Eberhardt, J Mistry… - Nucleic acids …, 2012 - academic.oup.com
Pfam is a widely used database of protein families, currently containing more than 13 000
manually curated protein families as of release 26.0. Pfam is available via servers in the UK ( …

Rfam 12.0: updates to the RNA families database

…, A Bateman, J Daub, RY Eberhardt… - Nucleic acids …, 2015 - academic.oup.com
The Rfam database (available at http://rfam.xfam.org ) is a collection of non-coding RNA
families represented by manually curated sequence alignments, consensus secondary …

Evidence for 28 genetic disorders discovered by combining healthcare and research data

…, KE Samocha, L Wiel, Z Zhang, KJ Arvai, RY Eberhardt… - Nature, 2020 - nature.com
De novo mutations in protein-coding genes are a well-established cause of developmental
disorders 1 . However, genes known to be associated with developmental disorders account …

[HTML][HTML] Genomic diagnosis of rare pediatric disease in the United Kingdom and Ireland

CF Wright, P Campbell, RY Eberhardt… - … England Journal of …, 2023 - Mass Medical Soc
Background Pediatric disorders include a range of highly penetrant, genetically heterogeneous
conditions amenable to genomewide diagnostic approaches. Finding a molecular …

[HTML][HTML] Prenatal exome sequencing analysis in fetal structural anomalies detected by ultrasonography (PAGE): a cohort study

J Lord, DJ McMullan, RY Eberhardt, G Rinck… - The Lancet, 2019 - thelancet.com
Background Fetal structural anomalies, which are detected by ultrasonography, have a
range of genetic causes, including chromosomal aneuploidy, copy number variations (CNVs; …

Fetal exome sequencing for isolated increased nuchal translucency: should we be doing it?

R Mellis, RY Eberhardt, SJ Hamilton… - … Journal of Obstetrics …, 2022 - Wiley Online Library
Objective To evaluate the utility of prenatal exome sequencing (ES) for isolated increased
nuchal translucency (NT) and to investigate factors that increase diagnostic yield. Design …

COngenital heart disease and the Diagnostic yield with Exome sequencing (CODE) study: prospective cohort study and systematic review

F Mone, RY Eberhardt, RK Morris… - … in Obstetrics & …, 2021 - Wiley Online Library
Objective To determine the incremental yield of antenatal exome sequencing (ES) over
chromosomal microarray analysis (CMA) or conventional karyotyping in prenatally diagnosed …

[HTML][HTML] Molecular autopsy by trio exome sequencing (ES) and postmortem examination in fetuses and neonates with prenatally identified structural anomalies

…, D Williams, S Hamilton, T Marton, RY Eberhardt… - Genetics in …, 2019 - Elsevier
Purpose To determine the diagnostic yield of combined exome sequencing (ES) and autopsy
in fetuses/neonates with prenatally identified structural anomalies resulting in termination …