[HTML][HTML] Integrating de novo and inherited variants in 42,607 autism cases identifies mutations in new moderate-risk genes

…, JB Hall, JU Obiajulu, JR Wright, SC Murali… - Nature …, 2022 - nature.com
To capture the full spectrum of genetic risk for autism, we performed a two-stage analysis of
rare de novo and inherited coding variants in 42,607 autism cases, including 35,130 new …

[HTML][HTML] The structure, function and evolution of a complete human chromosome 8

…, TA Graves-Lindsay, C Jain, K Hoekzema, SC Murali… - Nature, 2021 - nature.com
The complete assembly of each human chromosome is essential for understanding human
biology and evolution 1 , 2 . Here we use complementary long-read sequencing …

Best practices in insect genome sequencing: what works and what doesn't

S Richards, SC Murali - Current opinion in insect science, 2015 - Elsevier
Highlights • Insect genome assembly is difficult, unreliable and often low quality. • Obstacles
include DNA polymorphism, inability to inbreed and limited DNA quantities. • New short …

[HTML][HTML] The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

…, DST Hughes, R Janssen, SL Lee, I Maeso, SC Murali… - BMC biology, 2017 - Springer
Background The duplication of genes can occur through various mechanisms and is thought
to make a major contribution to the evolutionary diversification of organisms. There is …

[HTML][HTML] Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary …

…, SL Lee, H Lin, JA Lynch, AP Moczek, SC Murali… - Genome biology, 2016 - Springer
Background Relatively little is known about the genomic basis and evolution of wood-feeding
in beetles. We undertook genome sequencing and annotation, gene expression assays, …

[HTML][HTML] Hemimetabolous genomes reveal molecular basis of termite eusociality

…, JM Monroy-Kuhn, A Moser, SC Murali… - Nature ecology & …, 2018 - nature.com
Around 150 million years ago, eusocial termites evolved from within the cockroaches, 50
million years before eusocial Hymenoptera, such as bees and ants, appeared. Here, we report …

Recent ultra-rare inherited variants implicate new autism candidate risk genes

AB Wilfert, TN Turner, SC Murali, PH Hsieh… - Nature …, 2021 - nature.com
Autism is a highly heritable complex disorder in which de novo mutation (DNM) variation
contributes significantly to risk. Using whole-genome sequencing data from 3,474 families, we …

Parallel histories of horizontal gene transfer facilitated extreme reduction of endosymbiont genomes in sap-feeding insects

…, S Richards, J Qu, SC Murali… - Molecular biology …, 2014 - academic.oup.com
Bacteria confined to intracellular environments experience extensive genome reduction. In
extreme cases, insect endosymbionts have evolved genomes that are so gene-poor that they …

[HTML][HTML] Unique features of a global human ectoparasite identified through sequencing of the bed bug genome

…, H Lin, DST Hughes, EJ Duncan, SC Murali… - Nature …, 2016 - nature.com
The bed bug, Cimex lectularius, has re-established itself as a ubiquitous human ectoparasite
throughout much of the world during the past two decades. This global resurgence is likely …

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

…, RA Harris, M Haukness, IT Fiddes, SC Murali… - Science, 2020 - science.org
INTRODUCTION The rhesus macaque (Macaca mulatta) is one of the most widely used
nonhuman primate (NHP) models for studying human biology and disease. As a representative …