[HTML][HTML] Multiplexed nanopore sequencing of HLA-B locus in Māori and Pacific Island samples

KNT Ton, SL Cree, SJ Gronert-Sum… - Frontiers in …, 2018 - frontiersin.org
The human leukocyte antigen (HLA) system encodes the human major histocompatibility
complex (MHC). HLA-B is the most polymorphic gene in the MHC class I region and many HLA-…

Multiplexed nanopore sequencing of HLA-B locus in Māori and Polynesian samples

KNT Ton, SL Cree, SJ Gronert-Sum, TR Merriman… - bioRxiv, 2017 - biorxiv.org
The human leukocyte antigen (HLA) system is a gene family that encodes the human major
histocompatibility complex (MHC). HLA-B is the most polymorphic gene in the MHC class I …

Identification of a DMBT1 polymorphism associated with increased breast cancer risk and decreased promoter activity

…, O Strobel‐Freidekind, S GronertSum… - Human …, 2010 - Wiley Online Library
According to present estimations, the unfavorable combination of alleles with low penetrance
but high prevalence in the population might account for the major part of hereditary breast …

[HTML][HTML] Streptococcus mutans adhesin biotypes that match and predict individual caries development

A Esberg, N Sheng, L Mårell, R Claesson, K Persson… - …, 2017 - thelancet.com
Dental caries, which affects billions of people, is a chronic infectious disease that involves
Streptococcus mutans, which is nevertheless a poor predictor of individual caries development…

[HTML][HTML] Leucine-rich repeats of bacterial surface proteins serve as common pattern recognition motifs of human scavenger receptor gp340

V Loimaranta, J Hytönen, AT Pulliainen… - Journal of biological …, 2009 - ASBMB
Scavenger receptors are innate immune molecules recognizing and inducing the clearance
of non-host as well as modified host molecules. To recognize a wide pattern of invading …

Bioinformatics strategies, challenges, and opportunities for next generation sequencing-based HLA genotyping

S Klasberg, V Surendranath, V Lange… - Transfusion Medicine …, 2019 - karger.com
The advent of next generation sequencing (NGS) has altered the face of genotyping the
human leukocyte antigen (HLA) system in clinical, stem cell donor registry, and research …

Human Leukocyte Antigen Typing Using High-Throughput DNA and RNA Sequencing and Application for Cell Line Identification

S Boegel, JC Castle - Advances in …, 2019 - advancesinmolecularpathology.com
Human cell lines are essential tools for biological and medical research, such as models
predicting response to a treatment [1, 2], for identification of disease-specific biomarkers [3, 4], …

[HTML][HTML] The gout epidemic in French Polynesia: a modelling study of data from the Ma'i u'u epidemiological survey

T Pascart, KA Wasik, C Preda, V Chune… - The Lancet Global …, 2024 - thelancet.com
Background Gout is the most common cause of inflammatory arthritis worldwide, particularly
in Pacific regions. We aimed to establish the prevalence of gout and hyperuricaemia in …

High-resolution HLA typing by long reads from the R10. 3 Oxford nanopore flow cells

C Liu, X Yang, BF Duffy, J Hoisington-Lopez… - Human Immunology, 2021 - Elsevier
Nanopore sequencing has been investigated as a rapid and cost-efficient option for HLA
typing in recent years. Despite the lower raw read accuracy, encouraging typing accuracy has …

[HTML][HTML] Genetic-and lifestyle-dependent dental caries defined by the acidic proline-rich protein genes PRH1 and PRH2

N Strömberg, A Esberg, N Sheng, L Mårell… - …, 2017 - thelancet.com
Dental caries is a chronic infectious disease that affects billions of people with large individual
differences in activity. We investigated whether PRH1 and PRH2 polymorphisms in saliva …