The Amborella Genome and the Evolution of Flowering Plants
…, E Wafula, NS Altman, S Arikit, MJ Axtell, S Chamala… - Science, 2013 - science.org
… characterized by a copolymer of syringyl S and G subunits (S/G lignin). S/G lignin has also
been found in the lycophyte Selaginella moellendorffii, suggesting that S/G lignin may have …
been found in the lycophyte Selaginella moellendorffii, suggesting that S/G lignin may have …
Next‐generation sequencing and genome evolution in allopolyploids
…, LF Viccini, S Chamala… - American Journal of …, 2012 - Wiley Online Library
•Premise of the study: Hybridization and polyploidization (allopolyploidy) are ubiquitous in
the evolution of plants, but tracing the origins and subsequent evolution of the constituent …
the evolution of plants, but tracing the origins and subsequent evolution of the constituent …
[PDF][PDF] Rapid, repeated, and clustered loss of duplicate genes in allopolyploid plant populations of independent origin
The predictability of evolution is debatable, with recent evidence suggesting that outcomes
may be constrained by gene interaction networks [1]. Whole-genome duplication (WGD; …
may be constrained by gene interaction networks [1]. Whole-genome duplication (WGD; …
[HTML][HTML] The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
… Two ratios of acrylamide to bis-acrylamide (Fisher), 50:1 and 12.5:1, were used to make
gels with Young’s moduli of 1 kPa and 308 kPa, respectively. The Young’s moduli of the …
gels with Young’s moduli of 1 kPa and 308 kPa, respectively. The Young’s moduli of the …
The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation
…, KM Farr, WB Barbazuk, S Chamala… - Proceedings of the …, 2019 - National Acad Sciences
… inform ancient evolutionary relationships and genome doublings and the admixed nature
of Hass and provide a look at how pathogen interactions have shaped the avocado’s more …
of Hass and provide a look at how pathogen interactions have shaped the avocado’s more …
Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next‐generation sequencing and Sequenom iPLEX …
Tragopogon miscellus (Asteraceae) is an evolutionary model for the study of natural allopolyploidy,
but until now has been under‐resourced as a genetic model. Using 454 and Illumina …
but until now has been under‐resourced as a genetic model. Using 454 and Illumina …
MarkerMiner 1.0: A new application for phylogenetic marker development using angiosperm transcriptomes
Premise of the study: Targeted sequencing using next‐generation sequencing (NGS)
platforms offers enormous potential for plant systematics by enabling economical acquisition of …
platforms offers enormous potential for plant systematics by enabling economical acquisition of …
Assembly and Validation of the Genome of the Nonmodel Basal Angiosperm Amborella
Genome sequencing with next-generation sequence (NGS) technologies can now be applied
to organisms pivotal to addressing fundamental biological questions, but with genomes …
to organisms pivotal to addressing fundamental biological questions, but with genomes …
[HTML][HTML] Genome-wide identification of evolutionarily conserved alternative splicing events in flowering plants
… to its divergence from soybean, then it’s possible that this event will be conserved within a …
bean after it’s divergence from soybean is the most parsimonious explanation for it’s absence. …
bean after it’s divergence from soybean is the most parsimonious explanation for it’s absence. …
[HTML][HTML] Sulforaphane induces cell cycle arrest by protecting RB-E2F-1 complex in epithelial ovarian cancer cells
… There is a negligible increase of S phase cells after 12 hrs (0.7%) and 24 hrs (2.7%) with
SFN treatment compared with 40% of cells in S phase for control cells at 24 hrs. Further we …
SFN treatment compared with 40% of cells in S phase for control cells at 24 hrs. Further we …