Bacterial RNA polymerases: the wholo story
KS Murakami, SA Darst - Current opinion in structural biology, 2003 - Elsevier
Recent structural and biophysical results have provided unprecedented insights into the
structure and function of the bacterial RNA polymerase holoenzyme as it goes through the steps …
structure and function of the bacterial RNA polymerase holoenzyme as it goes through the steps …
Bacterial sigma factors: a historical, structural, and genomic perspective
A Feklístov, BD Sharon, SA Darst… - Annual review of …, 2014 - annualreviews.org
Transcription initiation is the crucial focal point of gene expression in prokaryotes. The key
players in this process, sigma factors (σs), associate with the catalytic core RNA polymerase …
players in this process, sigma factors (σs), associate with the catalytic core RNA polymerase …
Catabolite activator protein: DNA binding and transcription activation
CL Lawson, D Swigon, KS Murakami, SA Darst… - Current opinion in …, 2004 - Elsevier
Recently determined structures of the Escherichia coli catabolite activator protein (CAP) in
complex with DNA, and in complex with the RNA polymerase α subunit C-terminal domain (…
complex with DNA, and in complex with the RNA polymerase α subunit C-terminal domain (…
[HTML][HTML] Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
…, A Mustaev, K Murakami, S Nair, A Goldfarb, SA Darst - Cell, 2001 - cell.com
Rifampicin (Rif) is one of the most potent and broad spectrum antibiotics against bacterial
pathogens and is a key component of anti-tuberculosis therapy, stemming from its inhibition of …
pathogens and is a key component of anti-tuberculosis therapy, stemming from its inhibition of …
[HTML][HTML] Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 Å resolution
…, L Minakhin, C Richter, K Severinov, SA Darst - Cell, 1999 - cell.com
The X-ray crystal structure of Thermus aquaticus core RNA polymerase reveals a "crab claw"–shaped
molecule with a 27 Å wide internal channel. Located on the back wall of the …
molecule with a 27 Å wide internal channel. Located on the back wall of the …
Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex
…, S Masuda, EA Campbell, O Muzzin, SA Darst - Science, 2002 - science.org
The crystal structure of Thermus aquaticus RNA polymerase holoenzyme (α 2 ββ′ωσ A )
complexed with a fork-junction promoter DNA fragment has been determined by fitting high-…
complexed with a fork-junction promoter DNA fragment has been determined by fitting high-…
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution
KS Murakami, S Masuda, SA Darst - Science, 2002 - science.org
The crystal structure of the initiating form of Thermus aquaticus RNA polymerase, containing
core RNA polymerase (α 2 ββ′ω) and the promoter specificity σ subunit, has been …
core RNA polymerase (α 2 ββ′ω) and the promoter specificity σ subunit, has been …
[PDF][PDF] Structural basis for helicase-polymerase coupling in the SARS-CoV-2 replication-transcription complex
… Our measured kcat ($15 s … , SARS-CoV-2 nsp13-Val570 is Ile in SARSCoV nsp13) but
not to kcat values for SARS-CoV His6-nsp13 and glutathione S-transferase (GST)-nsp13 (0.2 s …
not to kcat values for SARS-CoV His6-nsp13 and glutathione S-transferase (GST)-nsp13 (0.2 s …
[PDF][PDF] Structure of the bacterial RNA polymerase promoter specificity σ subunit
…, CA Olson, O Weinman, ML Trester-Zedlitz, SA Darst - Molecular cell, 2002 - cell.com
… Based on the structure, we have re’s; see supplemental data … makes van der Waal’s contact
with the edge of the –32 T ring… Several side chains make van der Waal’s interactions with the …
with the edge of the –32 T ring… Several side chains make van der Waal’s interactions with the …
A structural model of transcription elongation
…, A Malhotra, V Nikiforov, A Goldfarb, SA Darst - Science, 2000 - science.org
… The elongation rate for the prokaryotic RNAPs is 50 to 100 nt/s, while the eukaryotic enzymes
are even slower, at 5 to 20 nt/s. This is contrasted with 300 to 1000 nt/s elongation rates for …
are even slower, at 5 to 20 nt/s. This is contrasted with 300 to 1000 nt/s elongation rates for …