Structure and function of the global ocean microbiome

…, C Dimier, M Picheral, S Searson, S Kandels-Lewis… - Science, 2015 - science.org
… We identify ocean microbial core functionality and reveal that >73% of its abundance is
shared with the human gut microbiome despite the physicochemical differences between these …

Eukaryotic plankton diversity in the sunlit ocean

…, C Dimier, M Picheral, S Searson, S Kandels-Lewis… - Science, 2015 - science.org
… Our data indicate that eukaryotic taxonomic diversity is higher in smaller organismal size
fractions, with a peak in the piconanoplankton (Fig. 1A), highlighting the richness of tiny …

Determinants of community structure in the global plankton interactome

…, C Dimier, M Picheral, S Searson, S Kandels-Lewis… - Science, 2015 - science.org
Species interaction networks are shaped by abiotic and biotic factors. Here, as part of the
Tara Oceans project, we studied the photic zone interactome using environmental factors and …

Plankton networks driving carbon export in the oligotrophic ocean

…, S Malviya, S Sunagawa, C Dimier, S Kandels-Lewis… - Nature, 2016 - nature.com
The biological carbon pump is the process by which CO 2 is transformed to organic carbon
via photosynthesis, exported through sinking particles, and finally sequestered in the deep …

Patterns and ecological drivers of ocean viral communities

…, SM Schwenck, S Speich, C Dimier, S Kandels-Lewis… - Science, 2015 - science.org
… (A) Shannon’s diversity H′ and Pielou’s evenness J calculated from protein cluster counts
… (B) Shannon’s diversity H′ and Pielou’s evenness J calculated from relative abundances of …

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

…, E Lara, J Poulain, S Pesant, S Kandels-Lewis… - Nature, 2016 - nature.com
… of microbe-specific viruses in nature is a fundamental block to the incorporation of these
viruses into ecosystem models. This is because most naturally occurring microbes and viruses …

[PDF][PDF] Marine DNA viral macro-and microdiversity from pole to pole

…, P Hingamp, D Iudicone, O Jaillon, S Kandels-Lewis… - Cell, 2019 - cell.com
… Key to assessing biodiversity changes across marine ecosystems is improving our understanding
of current microbial biodiversity levels, distribution patterns, and their ecological drivers…

[HTML][HTML] A holistic approach to marine eco-systems biology

…, D Iudicone, O Jaillon, S Kandels-Lewis… - PLoS …, 2011 - journals.plos.org
… This system is driven by a complex ecological network of autotrophic, heterotrophic, and
mixotrophic organisms, where trophodynamics and biogeochemical interdependencies are …

[PDF][PDF] INCENP binds the Aurora-related kinase AIRK2 and is required to target it to chromosomes, the central spindle and cleavage furrow

…, SP Wheatleya, AM Gouldsworthy, SE Kandels-Lewis… - Current biology, 2000 - cell.com
… On the basis of sequence homology with other AIRKs, we propose that p41 is a Xenopus
homologue of the chromosomal passenger AIM-1/AIRK2 (Figure 2). XAIRK2 is a basic protein …

Metagenomic 16S rDNA I llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities

…, O Jaillon, P Wincker, S KandelsLewis… - Environmental …, 2014 - Wiley Online Library
… may provide more realistic estimates of community richness and evenness than amplicon
454 tag s. In addition, mi tag s can capture expected beta diversity patterns. Using mi tag s is