[PDF][PDF] Real-time imaging of a single gene reveals transcription-initiated local confinement

T Germier, S Kocanova, N Walther, A Bancaud… - Biophysical journal, 2017 - cell.com
Genome dynamics are intimately linked to the regulation of gene expression, the most
fundamental mechanism in biology, yet we still do not know whether the very process of …

Induction of heme-oxygenase 1 requires the p38MAPK and PI3K pathways and suppresses apoptotic cell death following hypericin-mediated photodynamic therapy

S Kocanova, E Buytaert, JY Matroule, J Piette, J Golab… - Apoptosis, 2007 - Springer
… This study was undertaken to characterize at the molecular level the signaling pathway(s)
promoting HO-1 upregulation by hypericin-mediated PDT, with particular emphasis on the …

Molecular effectors and modulators of hypericin-mediated cell death in bladder cancer cells

…, JY Matroule, S Durinck, P Close, S Kocanova… - Oncogene, 2008 - nature.com
Photodynamic therapy (PDT) is an anticancer approach utilizing a light-absorbing molecule
and visible light irradiation to generate, in the presence of O 2, cytotoxic reactive oxygen …

[HTML][HTML] Ligands specify estrogen receptor alpha nuclear localization and degradation

S Kocanova, M Mazaheri, S Caze-Subra, K Bystricky - BMC cell biology, 2010 - Springer
Background The estrogen receptor alpha (ERα) is found predominately in the nucleus, both
in hormone stimulated and untreated cells. Intracellular distribution of the ERα changes in …

[HTML][HTML] Activation of estrogen-responsive genes does not require their nuclear co-localization

S Kocanova, EA Kerr, S Rafique, S Boyle, E Katz… - PLoS …, 2010 - journals.plos.org
… ) should co-localise at just one nuclear site, rather than each gene localizing at any of the
many other ERα sites or splicing factor enriched speckles, perhaps with any of the other 100 s

[HTML][HTML] Activation of p21 by HDAC Inhibitors Requires Acetylation of H2A.Z

L Bellucci, M Dalvai, S Kocanova, F Moutahir… - PloS one, 2013 - journals.plos.org
… All cell lines were maintained in Dulbecco’s modified Eagle’s medium (DMEM) with … V
program X-013 according to the manufacturer’s protocol. MDA-MB231 cells were mock-transfected …

Real-time imaging of specific genomic loci in eukaryotic cells using the ANCHOR DNA labelling system

T Germier, S Audibert, S Kocanova, D Lane, K Bystricky - Methods, 2018 - Elsevier
… at 98 C for 30 s followed by 35 cycles of 98 C for 10 s and 72 C for 75 s. Sequence the
products to identify the insertion sites. In the case of the insertions described in Germier et al. …

[HTML][HTML] Competition between transcription and loop extrusion modulates promoter and enhancer dynamics

…, K Meaburn, T Taylor, VM Shchuka, S Kocanova… - BioRxiv, 2023 - ncbi.nlm.nih.gov
… Imaging transcription bursts over two-hour windows, we measure an average bursting time
of ~200 s and an average time between bursts of ~630 s. As a population, the observed cells …

[HTML][HTML] TIP48/Reptin and H2A. Z requirement for initiating chromatin remodeling in estrogen-activated transcription

M Dalvai, L Fleury, L Bellucci, S Kocanova… - PLoS …, 2013 - journals.plos.org
… Amplification conditions: 1 min at 50C, 3 min at 95C followed by 40 cycles (20 s at 95C, 20
s at 60C, 20 s at 72C). mRNA expression were normalized against expression levels of the …

[HTML][HTML] Transcriptional Pathways in cPGI2-Induced Adipocyte Progenitor Activation for Browning

…, S Kocanova, IS Sousa, S Lerch… - Frontiers in …, 2015 - frontiersin.org
… The transcription factor E2F1 is known to promote G1–S cell cycle transition and S phase
progression (28), and thus, cPGI 2 may be inducing S phase gene expression, including DNA …