User profiles for S. Kurukuti

Sreenivasulu Kurukuti

University of Hyderabad
Verified email at uohyd.ac.in
Cited by 3552

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra-and interchromosomal interactions

…, U Singh, V Pant, V Tiwari, S Kurukuti… - Nature …, 2006 - nature.com
… DNA polymerase (Finnzymes) and the following program: 98 C for 30 s followed by 35 cycles
of 98 C for 10 s, 62 C for 20 s and 72 C for 10 s, with a final extension at 72 C for 2 min. The …

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

…, NF Cope, A Horton, S Andrews, S Kurukuti… - Nature …, 2010 - nature.com
The discovery of interchromosomal interactions in higher eukaryotes points to a functional
interplay between genome architecture and gene expression, challenging the view of …

CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

S Kurukuti, VK Tiwari, G Tavoosidana… - Proceedings of the …, 2006 - National Acad Sciences
… Neonatal mouse liver cells were dispersed by immediate mashing through a 70-mm nylon
cell strainer into Dulbecco’s modified Eagle’s medium. The 3C assays were done essentially …

Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon …

…, S Kurukuti, E Pugacheva, S Shamsuddin… - … and cellular biology, 2004 - Am Soc Microbiol
… each 35 S-labeled protein was mixed in 300 μl of BB-A with the GST beads taken at volumes
giving equal amounts of each immobilized protein as measured by 35 S … of the 35 S signal. …

Human tRNA genes function as chromatin insulators

JR Raab, J Chiu, J Zhu, S Katzman, S Kurukuti… - The EMBO …, 2012 - embopress.org
… -bound loci function as barrier insulators in the distantly related yeast, S. cerevisiae and …
We developed a barrier assay in S. pombe that is similar to the barrier assay in S. cerevisiae…

The role of transcription factories in large-scale structure and dynamics of interphase chromatin

T Sexton, D Umlauf, S Kurukuti, P Fraser - Seminars in cell & …, 2007 - Elsevier
The genome is spatially organized inside nuclei, with chromosomes and genes occupying
preferential positions relative to each other and to various nuclear landmarks. What drives this …

CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin

…, VK Tiwari, G Tavoosidana, S Kurukuti… - The EMBO …, 2005 - embopress.org
Most of the transcription factors, RNA polymerases and enhancer binding factors are absent
from condensed mitotic chromosomes. In contrast, epigenetic marks of active and inactive …

Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip

T Sexton, S Kurukuti, JA Mitchell, D Umlauf… - Nature protocols, 2012 - nature.com
Chromosome conformation capture (3C) is a powerful technique for analyzing spatial chromatin
organization in vivo. Technical variants of the assay ('4C') allow the systematic detection …

Chromatin looping defines expression of TAL1, its flanking genes, and regulation in T-ALL

Y Zhou, S Kurukuti, P Saffrey, M Vukovic… - Blood, The Journal …, 2013 - ashpublications.org
TAL1 is an important regulator of hematopoiesis and its expression is tightly controlled
despite complexities in its genomic organization. It is frequently misregulated in T-cell acute …

Podocyte derived TNF‐α mediates monocyte differentiation and contributes to glomerular injury

…, ASV Paturi, M Motrapu, S Kurukuti… - The FASEB …, 2022 - Wiley Online Library
… 30 s, 60C for 30 s, and 72C for 30 s. The expression levels of β- actin did not change under
the different experimental conditions and were used as an internal control to normalize each …