User profiles for S. Kurukuti
Sreenivasulu KurukutiUniversity of Hyderabad Verified email at uohyd.ac.in Cited by 3552 |
Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra-and interchromosomal interactions
… DNA polymerase (Finnzymes) and the following program: 98 C for 30 s followed by 35 cycles
of 98 C for 10 s, 62 C for 20 s and 72 C for 10 s, with a final extension at 72 C for 2 min. The …
of 98 C for 10 s, 62 C for 20 s and 72 C for 10 s, with a final extension at 72 C for 2 min. The …
Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells
…, NF Cope, A Horton, S Andrews, S Kurukuti… - Nature …, 2010 - nature.com
The discovery of interchromosomal interactions in higher eukaryotes points to a functional
interplay between genome architecture and gene expression, challenging the view of …
interplay between genome architecture and gene expression, challenging the view of …
CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2
… Neonatal mouse liver cells were dispersed by immediate mashing through a 70-mm nylon
cell strainer into Dulbecco’s modified Eagle’s medium. The 3C assays were done essentially …
cell strainer into Dulbecco’s modified Eagle’s medium. The 3C assays were done essentially …
Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon …
… each 35 S-labeled protein was mixed in 300 μl of BB-A with the GST beads taken at volumes
giving equal amounts of each immobilized protein as measured by 35 S … of the 35 S signal. …
giving equal amounts of each immobilized protein as measured by 35 S … of the 35 S signal. …
Human tRNA genes function as chromatin insulators
… -bound loci function as barrier insulators in the distantly related yeast, S. cerevisiae and …
We developed a barrier assay in S. pombe that is similar to the barrier assay in S. cerevisiae…
We developed a barrier assay in S. pombe that is similar to the barrier assay in S. cerevisiae…
The role of transcription factories in large-scale structure and dynamics of interphase chromatin
The genome is spatially organized inside nuclei, with chromosomes and genes occupying
preferential positions relative to each other and to various nuclear landmarks. What drives this …
preferential positions relative to each other and to various nuclear landmarks. What drives this …
CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin
Most of the transcription factors, RNA polymerases and enhancer binding factors are absent
from condensed mitotic chromosomes. In contrast, epigenetic marks of active and inactive …
from condensed mitotic chromosomes. In contrast, epigenetic marks of active and inactive …
Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip
Chromosome conformation capture (3C) is a powerful technique for analyzing spatial chromatin
organization in vivo. Technical variants of the assay ('4C') allow the systematic detection …
organization in vivo. Technical variants of the assay ('4C') allow the systematic detection …
Chromatin looping defines expression of TAL1, its flanking genes, and regulation in T-ALL
Y Zhou, S Kurukuti, P Saffrey, M Vukovic… - Blood, The Journal …, 2013 - ashpublications.org
TAL1 is an important regulator of hematopoiesis and its expression is tightly controlled
despite complexities in its genomic organization. It is frequently misregulated in T-cell acute …
despite complexities in its genomic organization. It is frequently misregulated in T-cell acute …
Podocyte derived TNF‐α mediates monocyte differentiation and contributes to glomerular injury
…, ASV Paturi, M Motrapu, S Kurukuti… - The FASEB …, 2022 - Wiley Online Library
… 30 s, 60C for 30 s, and 72C for 30 s. The expression levels of β- actin did not change under
the different experimental conditions and were used as an internal control to normalize each …
the different experimental conditions and were used as an internal control to normalize each …