User profiles for Sanja Rogic

Sanja Rogic

Verified email at ubc.ca
Cited by 6665

[HTML][HTML] Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

…, DL Trinh, J Tamura-Wells, S Li, MR Firme, S Rogic… - Nature, 2011 - nature.com
Follicular lymphoma (FL) and diffuse large B-cell lymphoma (DLBCL) are the two most
common non-Hodgkin lymphomas (NHLs). Here we sequenced tumour and matched normal …

[HTML][HTML] Concurrent expression of MYC and BCL2 in diffuse large B-cell lymphoma treated with rituximab plus cyclophosphamide, doxorubicin, vincristine, and …

…, JM Connors, S Ben-Neriah, S Rogic… - Journal of clinical …, 2012 - ncbi.nlm.nih.gov
Purpose Diffuse large B-cell lymphoma (DLBCL) is curable in 60% of patients treated with
rituximab plus cyclophosphamide, doxorubicin, vincristine, and prednisone (R-CHOP). MYC …

A physical map of the human genome.

…, DR Cox, D Haussler, WJ Kent, T Furey, S Rogic… - Nature, 2001 - go.gale.com
The International Human Genome Sequencing Consortium (IHGSC) used a hierarchical
mapping and sequencing strategy to construct the working draft of the human genome. This …

Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing

…, B Woolcock, N Farnoud, S Rogic… - Blood, The Journal …, 2013 - ashpublications.org
Diffuse large B-cell lymphoma (DLBCL) is a genetically heterogeneous cancer composed of
at least 2 molecular subtypes that differ in gene expression and distribution of mutations. …

Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma

R Kridel, B Meissner, S Rogic, M Boyle… - Blood, The Journal …, 2012 - ashpublications.org
Mantle cell lymphoma (MCL), an aggressive subtype of non-Hodgkin lymphoma, is characterized
by the hallmark translocation t(11;14)(q13;q32) and the resulting overexpression of …

Evaluation of gene-finding programs on mammalian sequences

S Rogic, AK Mackworth, FBF Ouellette - Genome research, 2001 - genome.cshlp.org
We present an independent comparative analysis of seven recently developed gene-finding
programs: FGENES , GeneMark.hmm , Genie , Genscan , HMMgene , Morgan , and MZEF . …

Recurrent somatic mutations of PTPN1 in primary mediastinal B cell lymphoma and Hodgkin lymphoma

…, S Ben-Neriah, A Mottok, RS Lim, M Boyle, S Rogic… - Nature …, 2014 - nature.com
Classical Hodgkin lymphoma and primary mediastinal B cell lymphoma (PMBCL) are
related lymphomas sharing pathological, molecular and clinical characteristics. Here we …

A physical map of the human genome

…, DR Cox, D Haussler, WJ Kent, T Furey, S Rogic… - …, 2001 - ui.adsabs.harvard.edu
The human genome is by far the largest genome to be sequenced, and its size and complexity
present many challenges for sequence assembly. The International Human Genome …

[HTML][HTML] Gene expression–based model using formalin-fixed paraffin-embedded biopsies predicts overall survival in advanced-stage classical Hodgkin lymphoma

DW Scott, FC Chan, F Hong, S Rogic… - Journal of Clinical …, 2013 - ncbi.nlm.nih.gov
Purpose Our aim was to reliably identify patients with advanced-stage classical Hodgkin
lymphoma (cHL) at increased risk of death by developing a robust predictor of overall survival (…

The E3 ubiquitin ligase UBR5 is recurrently mutated in mantle cell lymphoma

B Meissner, R Kridel, RS Lim, S Rogic… - Blood, The Journal …, 2013 - ashpublications.org
We have recently reported the application of RNAseq to mantle cell lymphoma (MCL)
transcriptomes revealing recurrent mutations in NOTCH1. Here we describe the targeted …