User profiles for Sarah K. Hilton
Sarah K. HiltonDepartment of Genome Sciences, University of Washington Verified email at uw.edu Cited by 3342 |
[PDF][PDF] Deep mutational scanning of SARS-CoV-2 receptor binding domain reveals constraints on folding and ACE2 binding
The receptor binding domain (RBD) of the SARS-CoV-2 spike glycoprotein mediates viral
attachment to ACE2 receptor and is a major determinant of host range and a dominant target …
attachment to ACE2 receptor and is a major determinant of host range and a dominant target …
[PDF][PDF] Complete mapping of mutations to the SARS-CoV-2 spike receptor-binding domain that escape antibody recognition
Antibodies targeting the SARS-CoV-2 spike receptor-binding domain (RBD) are being developed
as therapeutics and are a major contributor to neutralizing antibody responses elicited …
as therapeutics and are a major contributor to neutralizing antibody responses elicited …
[HTML][HTML] Metataxonomic and metagenomic approaches vs. culture-based techniques for clinical pathology
Diagnoses that are both timely and accurate are critically important for patients with life-threatening
or drug resistant infections. Technological improvements in High-Throughput …
or drug resistant infections. Technological improvements in High-Throughput …
Mapping mutational effects along the evolutionary landscape of HIV envelope
HK Haddox, AS Dingens, SK Hilton, J Overbaugh… - Elife, 2018 - elifesciences.org
10.7554/eLife.34420.001 The immediate evolutionary space accessible to HIV is largely
determined by how single amino acid mutations affect fitness. These mutational effects can shift …
determined by how single amino acid mutations affect fitness. These mutational effects can shift …
Single-molecule long-read 16S sequencing to characterize the lung microbiome from mechanically ventilated patients with suspected pneumonia
…, M Pérez-Losada, SK Hilton… - Journal of clinical …, 2014 - Am Soc Microbiol
In critically ill patients, the development of pneumonia results in significant morbidity and
mortality and additional health care costs. The accurate and rapid identification of the microbial …
mortality and additional health care costs. The accurate and rapid identification of the microbial …
[HTML][HTML] dms-view: Interactive visualization tool for deep mutational scanning data
The high-throughput technique of deep mutational scanning (DMS) has recently made it
possible to experimentally measure the effects of all amino-acid mutations to a protein (Fowler & …
possible to experimentally measure the effects of all amino-acid mutations to a protein (Fowler & …
Drug-regulated CD33-targeted CAR T cells control AML using clinically optimized rapamycin dosing
…, G Tampella, D Xia, PPL So, SK Hilton… - The Journal of …, 2024 - Am Soc Clin Investig
Chimeric antigen receptor (CAR) designs that incorporate pharmacologic control are desirable,
however designs suitable for clinical translation are needed. We designed a fully human, …
however designs suitable for clinical translation are needed. We designed a fully human, …
High-resolution mapping of the neutralizing and binding specificities of polyclonal sera post-HIV Env trimer vaccination
AS Dingens, P Pratap, K Malone, SK Hilton, T Ketas… - Elife, 2021 - elifesciences.org
Mapping polyclonal serum responses is critical to rational vaccine design. However, most
high-resolution mapping approaches involve isolating and characterizing individual antibodies…
high-resolution mapping approaches involve isolating and characterizing individual antibodies…
[HTML][HTML] phydms: Software for phylogenetic analyses informed by deep mutational scanning
It has recently become possible to experimentally measure the effects of all amino-acid point
mutations to proteins using deep mutational scanning. These experimental measurements …
mutations to proteins using deep mutational scanning. These experimental measurements …
Modeling site-specific amino-acid preferences deepens phylogenetic estimates of viral sequence divergence
Molecular phylogenetics is often used to estimate the time since the divergence of modern
gene sequences. For highly diverged sequences, such phylogenetic techniques sometimes …
gene sequences. For highly diverged sequences, such phylogenetic techniques sometimes …