Bacterial systems for production of heterologous proteins

S Zerbs, AM Frank, FR Collart - Methods in enzymology, 2009 - Elsevier
Proteins are the working molecules of all biological systems and participate in a majority of
cellular chemical reactions and biological processes. Knowledge of the properties and …

[HTML][HTML] Dynamics of aspen roots colonization by pseudomonads reveals strain-specific and mycorrhizal-specific patterns of biofilm formation

MF Noirot-Gros, S Shinde, PE Larsen, S Zerbs… - Frontiers in …, 2018 - frontiersin.org
Rhizosphere-associated Pseudomonas fluorescens are known plant growth promoting (PGP)
and mycorrhizal helper bacteria (MHB) of many plants and ectomycorrhizal fungi. We …

[HTML][HTML] Pseudomonas fluorescens increases mycorrhization and modulates expression of antifungal defense response genes in roots of aspen seedlings

S Shinde, S Zerbs, FR Collart, JR Cumming, P Noirot… - BMC Plant …, 2019 - Springer
Background Plants, fungi, and bacteria form complex, mutually-beneficial communities within
the soil environment. In return for photosynthetically derived sugars in the form of exudates …

[HTML][HTML] Functional imaging of microbial interactions with tree roots using a microfluidics setup

…, SV Shinde, C Akins, JL Johnson, S Zerbs… - Frontiers in Plant …, 2020 - frontiersin.org
Coupling microfluidics with microscopy has emerged as a powerful approach to study at
cellular resolution the dynamics in plant physiology and root-microbe interactions (RMIs). Most …

Small-scale expression of proteins in E. coli

S Zerbs, S Giuliani, F Collart - Methods in enzymology, 2014 - Elsevier
Proteins participate in virtually every cellular activity, and a knowledge of protein function is
essential for an understanding of biological systems. However, protein diversity necessitates …

Characterization of transport proteins for aromatic compounds derived from lignin: benzoate derivative binding proteins

K Michalska, C Chang, JC Mack, S Zerbs… - Journal of molecular …, 2012 - Elsevier
In vitro growth experiments have demonstrated that aromatic compounds derived from lignin
can be metabolized and represent a major carbon resource for many soil bacteria. However…

Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p‐Coumaric acid and related aromatic acids

…, J Osipiuk, E Landorf, JC Mack, S Zerbs… - Proteins: Structure …, 2013 - Wiley Online Library
Lignin comprises 15–25% of plant biomass and represents a major environmental carbon
source for utilization by soil microorganisms. Access to this energy resource requires the …

[HTML][HTML] Biophysical and structural characterization of a sequence-diverse set of solute-binding proteins for aromatic compounds

R Pietri, S Zerbs, DM Corgliano, M Allaire… - Journal of Biological …, 2012 - ASBMB
Rhodopseudomonas palustris metabolizes aromatic compounds derived from lignin
degradation products and has the potential for bioremediation of xenobiotic compounds. We …

Transport capabilities of environmental Pseudomonads for sulfur compounds

S Zerbs, PJ Korajczyk, PH Noirot, FR Collart - Protein Science, 2017 - Wiley Online Library
Sulfur is an essential element in plant rhizospheres and microbial activity plays a key role in
increasing the biological availability of sulfur in soil environments. To better understand the …

Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information

PE Larsen, S Zerbs, PD Laible, FR Collart… - Msystems, 2018 - Am Soc Microbiol
Bacteria are not simply passive consumers of nutrients or merely steady-state systems.
Rather, bacteria are active participants in their environments, collecting information from their …