User profiles for Schyler O. Nunziata
 | Schyler NunziataBioinformatician, USDA Verified email at usda.gov Cited by 506 |
Estimation of contemporary effective population size and population declines using RAD sequence data
SO Nunziata, DW Weisrock - Heredity, 2018 - nature.com
Large genomic data sets generated with restriction site-associated DNA sequencing (RADseq),
in combination with demographic inference methods, are improving our ability to gain …
in combination with demographic inference methods, are improving our ability to gain …
Genomic data detect corresponding signatures of population size change on an ecological time scale in two salamander species
Understanding the demography of species over recent history (eg <100 years) is critical in
studies of ecology and evolution, but records of population history are rarely available. …
studies of ecology and evolution, but records of population history are rarely available. …
[HTML][HTML] Comparative analysis of tomato brown rugose fruit virus isolates shows limited genetic diversity
Tomato is an important vegetable in the United States and around the world. Recently, tomato
brown rugose fruit virus (ToBRFV), an emerging tobamovirus, has impacted tomato crops …
brown rugose fruit virus (ToBRFV), an emerging tobamovirus, has impacted tomato crops …
Complete Genome Sequence of a Tomato Brown Rugose Fruit Virus Isolated in the United States
The complete genome sequence of a US isolate of a Tomato brown rugose fruit virus (ToBRFV)
(CA18-01) was obtained through Illumina and MinION sequencing. The US ToBRFV …
(CA18-01) was obtained through Illumina and MinION sequencing. The US ToBRFV …
Surmounting the large-genome “problem” for genomic data generation in salamanders
Salamanders have some of the largest genomes among all extant organisms, due in large
part to the proliferation of repetitive elements and the expansion of intron size. This increased …
part to the proliferation of repetitive elements and the expansion of intron size. This increased …
Comparison of nanopore sequencing protocols and real-time analysis for phytopathogen diagnostics
T Phannareth, SO Nunziata, MJ Stulberg… - Plant Health …, 2020 - Am Phytopath Society
Next-generation sequencing technologies have aided molecular detection and diagnosis of
plant pathogens. Short read sequencing technologies can be expensive, time consuming, …
plant pathogens. Short read sequencing technologies can be expensive, time consuming, …
[HTML][HTML] 32 species validation of a new Illumina paired-end approach for the development of microsatellites
SL Lance, CN Love, SO Nunziata, JR O'Bryhim… - PloS one, 2013 - journals.plos.org
Development and optimization of novel species-specific microsatellites, or simple sequence
repeats (SSRs) remains an important step for studies in ecology, evolution, and behavior. …
repeats (SSRs) remains an important step for studies in ecology, evolution, and behavior. …
Mutations in a Novel Cadherin Gene Associated with Bt Resistance in Helicoverpa zea
Transgenic corn and cotton produce crystalline (Cry) proteins derived from the soil bacterium
Bacillus thuringiensis (Bt) that are toxic to lepidopteran larvae. Helicoverpa zea, a key pest …
Bacillus thuringiensis (Bt) that are toxic to lepidopteran larvae. Helicoverpa zea, a key pest …
Temporal genetic and demographic monitoring of pond-breeding amphibians in three contrasting population systems
Quantifying the relationship between demographic patterns and genetic diversity are important
in predicting temporal population genetic changes. To make predictions there must be an …
in predicting temporal population genetic changes. To make predictions there must be an …
Habitat structure and colony structure constrain extrapair paternity in a colonial bird
Individual variation in sexual fidelity and extrapair paternity (EPP) is widely attributed to
environmental heterogeneity, but the only variables known to be influential are food abundance …
environmental heterogeneity, but the only variables known to be influential are food abundance …