User profiles for Sean Benler
sean benlerNCBI Verified email at nih.gov Cited by 1740 |
Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infection
Widespread antibiotic use in clinical medicine and the livestock industry has contributed to
the global spread of multidrug-resistant (MDR) bacterial pathogens, including Acinetobacter …
the global spread of multidrug-resistant (MDR) bacterial pathogens, including Acinetobacter …
[HTML][HTML] Thousands of previously unknown phages discovered in whole-community human gut metagenomes
Background Double-stranded DNA bacteriophages (dsDNA phages) play pivotal roles in
structuring human gut microbiomes; yet, the gut virome is far from being fully characterized, …
structuring human gut microbiomes; yet, the gut virome is far from being fully characterized, …
[HTML][HTML] Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features
N Yutin, S Benler, SA Shmakov, YI Wolf… - Nature …, 2021 - nature.com
CrAssphage is the most abundant human-associated virus and the founding member of a
large group of bacteriophages, discovered in animal-associated and environmental …
large group of bacteriophages, discovered in animal-associated and environmental …
Seeker: alignment-free identification of bacteriophage genomes by deep learning
N Auslander, AB Gussow, S Benler, YI Wolf… - Nucleic acids …, 2020 - academic.oup.com
Recent advances in metagenomic sequencing have enabled discovery of diverse, distinct
microbes and viruses. Bacteriophages, the most abundant biological entity on Earth, evolve …
microbes and viruses. Bacteriophages, the most abundant biological entity on Earth, evolve …
[PDF][PDF] Modularity and diversity of target selectors in Tn7 transposons
To spread, transposons must integrate into target sites without disruption of essential genes
while avoiding host defense systems. Tn7-like transposons employ multiple mechanisms for …
while avoiding host defense systems. Tn7-like transposons employ multiple mechanisms for …
Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes
Transposition is a major mechanism of horizontal gene mobility in prokaryotes. However,
exploration of the genes mobilized by transposons (cargo) is hampered by the difficulty in …
exploration of the genes mobilized by transposons (cargo) is hampered by the difficulty in …
Metabolomics of reef benthic interactions reveals a bioactive lipid involved in coral defence
…, I Galtier d'Auriac, S Benler… - … of the Royal …, 2016 - royalsocietypublishing.org
Holobionts are assemblages of microbial symbionts and their macrobial host. As extant
representatives of some of the oldest macro-organisms, corals and algae are important for …
representatives of some of the oldest macro-organisms, corals and algae are important for …
Alternating lysis and lysogeny is a winning strategy in bacteriophages due to Parrondo's paradox
Temperate bacteriophages lyse or lysogenize host cells depending on various parameters of
infection, a key one being the ratio of the number of free viruses to the number of host cells. …
infection, a key one being the ratio of the number of free viruses to the number of host cells. …
[HTML][HTML] A diversity-generating retroelement encoded by a globally ubiquitous Bacteroides phage
Background Diversity-generating retroelements (DGRs) are genetic cassettes that selectively
mutate target genes to produce hypervariable proteins. First characterized in Bordetella …
mutate target genes to produce hypervariable proteins. First characterized in Bordetella …
[HTML][HTML] Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes
Background Bacteriophages encode genes that modify bacterial functions during infection.
The acquisition of phage-encoded virulence genes is a major mechanism for the rise of …
The acquisition of phage-encoded virulence genes is a major mechanism for the rise of …