User profiles for Sebastian Steinhauser

Sebastian Steinhauser

Novartis Institutes for BioMedical Research - Discovery Sciences Data Science
Verified email at novartis.com
Cited by 320

[PDF][PDF] Nervous system regionalization entails axial allocation before neural differentiation

V Metzis, S Steinhauser, E Pakanavicius, M Gouti… - Cell, 2018 - cell.com
Neural induction in vertebrates generates a CNS that extends the rostral-caudal length of
the body. The prevailing view is that neural cells are initially induced with anterior (forebrain) …

A comprehensive comparison of tools for differential ChIP-seq analysis

S Steinhauser, N Kurzawa, R Eils… - Briefings in …, 2016 - academic.oup.com
ChIP-seq has become a widely adopted genomic assay in recent years to determine binding
sites for transcription factors or enrichments for specific histone modifications. Beside …

Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs

…, JA Zagalak, S Sidorov, S Steinhauser… - Nucleic Acids …, 2021 - academic.oup.com
RNA-binding proteins (RBPs) play diverse roles in regulating co-transcriptional RNA-processing
and chromatin functions, but our knowledge of the repertoire of chromatin-associated …

ShinyButchR: Interactive NMF-based decomposition workflow of genome-scale datasets

…, N Kurzawa, S Steinhauser… - Biology Methods and …, 2020 - academic.oup.com
Non-negative matrix factorization (NMF) has been widely used for the analysis of genomic
data to perform feature extraction and signature identification due to the interpretability of the …

Residual stresses couple microscopic and macroscopic scales

S Steinhäuser, T Treskatis, S Turek… - arXiv preprint arXiv …, 2023 - arxiv.org
We show how residual stresses emerge in a visco-elastic material as a signature of its past
flow history, through an interplay between flow-modified microscopic relaxation and …

[PDF][PDF] Powering the Service Economy with RPA and AI

…, S Döschl, S Steinhäuser - The Boston …, 2017 - boston-consulting-group-brightspot …
Robotic process automation (RPA) and artificial intelligence (AI) have traditionally been
viewed as separate and somewhat unequal worlds—RPA proponents consider AI to be …

[PDF][PDF] The double game of digital strategy

…, C Gauger, S Steinhäuser - Bcg …, 2015 - boston-consulting-group-brightspot …
Today’s production, distribution, and uses of electricity, in spite of significant improvements
in efficiency, would be familiar to Tesla and Westinghouse. By contrast, the possibilities and …

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

D Hüebschmann, N Kurzawa, S Steinhauser… - bioRxiv, 2017 - biorxiv.org
Metazoans are crucially dependent on multiple layers of gene regulatory mechanisms which
allow them to control gene expression across developmental stages, tissues and cell types. …

ChromWave: Deciphering the DNA-encoded competition between transcription factors and nucleosomes with deep neural networks

SA Cakiroglu, S Steinhauser, J Smith, W Xing… - BioRxiv, 2021 - biorxiv.org
Transcription factors (TFs) regulate gene expression by recognising and binding specific
DNA sequences. At times, these regulatory elements may be occluded by nucleosomes, …

Epiblast morphogenesis is controlled by selective mRNA decay triggered by LIN28A relocation

M Modic, IR de Los Mozos, S Steinhauser… - bioRxiv, 2021 - biorxiv.org
The embryonic progression from naïve to primed pluripotency is accompanied by the rapid
decay of pluripotency-associated mRNAs and a concomitant radical morphogenetic …