User profiles for Shaomei He
Shaomei HeUniversity of Wisconsin-Madison Verified email at wisc.edu Cited by 4557 |
Microbiology of 'Candidatus Accumulibacter' in activated sludge
S He, KD McMahon - Microbial biotechnology, 2011 - Wiley Online Library
‘Candidatus Accumulibacter’ is a biotechnologically important bacterial group that can
accumulate large amounts of intracellular polyphosphate, contributing to biological phosphorus …
accumulate large amounts of intracellular polyphosphate, contributing to biological phosphorus …
Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
…, KW Barry, AC McHardy, C Yeates, S He… - Nature …, 2006 - nature.com
Enhanced biological phosphorus removal (EBPR) is one of the best-studied microbially
mediated industrial processes because of its ecological and economic relevance. Despite this, it …
mediated industrial processes because of its ecological and economic relevance. Despite this, it …
[HTML][HTML] Primer and platform effects on 16S rRNA tag sequencing
J Tremblay, K Singh, A Fern, ES Kirton, S He… - Frontiers in …, 2015 - frontiersin.org
Sequencing of 16S rRNA gene tags is a popular method for profiling and comparing microbial
communities. The protocols and methods used, however, vary considerably with regard to …
communities. The protocols and methods used, however, vary considerably with regard to …
“Candidatus Accumulibacter” Population Structure in Enhanced Biological Phosphorus Removal Sludges as Revealed by Polyphosphate Kinase Genes
S He, DL Gall, KD McMahon - Applied and environmental …, 2007 - Am Soc Microbiol
We investigated the fine-scale population structure of the “Candidatus Accumulibacter”
lineage in enhanced biological phosphorus removal (EBPR) systems using the polyphosphate …
lineage in enhanced biological phosphorus removal (EBPR) systems using the polyphosphate …
Metagenomic analysis of phosphorus removing sludgecommunities
…, F Warnecke, K Barry, AC McHardy, C Yeates, S He… - Nature …, 2006 - osti.gov
Enhanced Biological Phosphorus Removal (EBPR) is not wellunderstood at the metabolic
level despite being one of the best-studiedmicrobially-mediated industrial processes due to its …
level despite being one of the best-studiedmicrobially-mediated industrial processes due to its …
Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
The predominance of rRNAs in the transcriptome is a major technical challenge in sequence-based
analysis of cDNAs from microbial isolates and communities. Several approaches …
analysis of cDNAs from microbial isolates and communities. Several approaches …
Denitrification capabilities of two biological phosphorus removal sludges dominated by different 'Candidatus Accumulibacter' clades
The capability of ‘Candidatus Accumulibacter’ to use nitrate as an electron acceptor for
phosphorus uptake was investigated using two activated sludge communities. The two …
phosphorus uptake was investigated using two activated sludge communities. The two …
[HTML][HTML] Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood-and dung-feeding higher termites
Termites effectively feed on many types of lignocellulose assisted by their gut microbial
symbionts. To better understand the microbial decomposition of biomass with varied chemical …
symbionts. To better understand the microbial decomposition of biomass with varied chemical …
A bacterial metapopulation adapts locally to phage predation despite global dispersal
V Kunin, S He, F Warnecke, SB Peterson… - Genome …, 2008 - genome.cshlp.org
Using a combination of bacterial and phage-targeted metagenomics, we analyzed two
geographically remote sludge bioreactors enriched in a single bacterial species Candidatus …
geographically remote sludge bioreactors enriched in a single bacterial species Candidatus …
Dual role of humic substances as electron donor and shuttle for dissimilatory iron reduction
Dissimilatory iron-reducing bacteria (DIRB) are known to use humic substances (HS) as
electron shuttles for dissimilatory iron reduction (DIR) by transferring electrons to HS-quinone …
electron shuttles for dissimilatory iron reduction (DIR) by transferring electrons to HS-quinone …