User profiles for Shimon Bershtein
Shimon BershteinBen-Gurion University of the Negev Verified email at bgu.ac.il Cited by 1638 |
Robustness–epistasis link shapes the fitness landscape of a randomly drifting protein
S Bershtein, M Segal, R Bekerman, N Tokuriki… - Nature, 2006 - nature.com
The distribution of fitness effects of protein mutations is still unknown 1 , 2 . Of particular
interest is whether accumulating deleterious mutations interact, and how the resulting epistatic …
interest is whether accumulating deleterious mutations interact, and how the resulting epistatic …
[HTML][HTML] Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes
Predicting evolutionary paths to antibiotic resistance is key for understanding and controlling
drug resistance. When considering a single final resistant genotype, epistatic contingencies …
drug resistance. When considering a single final resistant genotype, epistatic contingencies …
Soluble oligomerization provides a beneficial fitness effect on destabilizing mutations
S Bershtein, W Mu… - Proceedings of the …, 2012 - National Acad Sciences
Mutations create the genetic diversity on which selective pressures can act, yet also create
structural instability in proteins. How, then, is it possible for organisms to ameliorate mutation-…
structural instability in proteins. How, then, is it possible for organisms to ameliorate mutation-…
[HTML][HTML] Protein homeostasis imposes a barrier on functional integration of horizontally transferred genes in bacteria
Horizontal gene transfer (HGT) plays a central role in bacterial evolution, yet the molecular
and cellular constraints on functional integration of the foreign genes are poorly understood. …
and cellular constraints on functional integration of the foreign genes are poorly understood. …
Chromosomal barcoding of E. coli populations reveals lineage diversity dynamics at high resolution
Evolutionary dynamics in large asexual populations is strongly influenced by multiple
competing beneficial lineages, most of which segregate at very low frequencies. However, …
competing beneficial lineages, most of which segregate at very low frequencies. However, …
Intense neutral drifts yield robust and evolvable consensus proteins
S Bershtein, K Goldin, DS Tawfik - Journal of molecular biology, 2008 - Elsevier
What changes occur when a natural protein that had been under low mutation rates is
subjected to a neutral drift at high mutational loads, thus generating genetically diverse (…
subjected to a neutral drift at high mutational loads, thus generating genetically diverse (…
Advances in laboratory evolution of enzymes
S Bershtein, DS Tawfik - Current opinion in chemical biology, 2008 - Elsevier
We address recent developments in the area of laboratory, or directed evolution, with a focus
on enzymes and on new methodologies of generic potential. We survey three main areas: (i…
on enzymes and on new methodologies of generic potential. We survey three main areas: (i…
[PDF][PDF] Protein quality control acts on folding intermediates to shape the effects of mutations on organismal fitness
What are the molecular properties of proteins that fall on the radar of protein quality control (PQC)?
Here we mutate the E. coli's gene encoding dihydrofolate reductase (DHFR) and …
Here we mutate the E. coli's gene encoding dihydrofolate reductase (DHFR) and …
Biophysical principles predict fitness landscapes of drug resistance
Fitness landscapes of drug resistance constitute powerful tools to elucidate mutational
pathways of antibiotic escape. Here, we developed a predictive biophysics-based fitness …
pathways of antibiotic escape. Here, we developed a predictive biophysics-based fitness …
Bridging the physical scales in evolutionary biology: from protein sequence space to fitness of organisms and populations
… Author links open overlay panel Shimon Bershtein 1 , Adrian WR Serohijos 2 , Eugene I …
Bershtein et al. [2] demonstrated that local perturbation of a central metabolic enzyme by …
Bershtein et al. [2] demonstrated that local perturbation of a central metabolic enzyme by …