Transcriptomics approaches in the early Arabidopsis embryo

J Palovaara, S Saiga, D Weijers - Trends in Plant Science, 2013 - cell.com
Early plant embryogenesis condenses the fundamental processes underlying plant development
into a short sequence of predictable steps. The main tissues, as well as stem cells for …

A SOSEKI-based coordinate system interprets global polarity cues in Arabidopsis

…, M Van Dop, L Van Galen, S Saiga… - Nature plants, 2019 - nature.com
Multicellular development requires coordinated cell polarization relative to body axes, and
translation to oriented cell division 1 , 2 – 3 . In plants, it is unknown how cell polarities are …

Transcriptome dynamics revealed by a gene expression atlas of the early Arabidopsis embryo

J Palovaara, S Saiga, JR Wendrich… - Nature Plants, 2017 - nature.com
During early plant embryogenesis, precursors for all major tissues and stem cells are formed.
While several components of the regulatory framework are known, how cell fates are …

The Arabidopsis OBERON1 and OBERON2 genes encode plant homeodomain finger proteins and are required for apical meristem maintenance

S Saiga, C Furumizu, R Yokoyama, T Kurata, S Sato… - 2008 - journals.biologists.com
Maintenance of the stem cell population located at the apical meristems is essential for
repetitive organ initiation during the development of higher plants. Here, we have characterized …

Framework for gradual progression of cell ontogeny in the Arabidopsis root meristem

JR Wendrich, BK Möller, S Li, S Saiga… - Proceedings of the …, 2017 - National Acad Sciences
In plants, apical meristems allow continuous growth along the body axis. Within the root
apical meristem, a group of slowly dividing quiescent center cells is thought to limit stem cell …

Auxin regulation of embryonic root formation

S Yoshida, S Saiga, D Weijers - Plant and cell physiology, 2013 - academic.oup.com
The plant hormone auxin was initially identified as the bioactive substance that induces
roots in plant tissue culture. In the past decades, mechanisms for auxin action, including its …

Control of embryonic meristem initiation in Arabidopsis by PHD-finger protein complexes

S Saiga, B Möller, A Watanabe-Taneda, M Abe… - …, 2012 - journals.biologists.com
Plant growth is directed by the activity of stem cells within meristems. The first meristems are
established during early embryogenesis, and this process involves the specification of both …

Molecular Characterization of Arabidopsis GAL4/UAS Enhancer Trap Lines Identifies Novel Cell-Type-Specific Promoters

T Radoeva, CA Ten Hove, S Saiga… - Plant Physiology, 2016 - academic.oup.com
Cell-type-specific gene expression is essential to distinguish between the numerous cell types
of multicellular organism. Therefore, cell-type-specific gene expression is tightly regulated …

[HTML][HTML] OBE3 and WUS Interaction in Shoot Meristem Stem Cell Regulation

TF Lin, S Saiga, M Abe, T Laux - PloS one, 2016 - journals.plos.org
The stem cells in the shoot apical meristem (SAM) are the origin of all above ground tissues
in plants. In Arabidopsis thaliana, shoot meristem stem cells are maintained by the …

Cell-type-specific promoter identification using enhancer trap lines

T Radoeva, S Saiga, D Weijers - Plant Transcription Factors: Methods and …, 2018 - Springer
Many developmental processes involve transitions between different cell identities as cells
differentiate or undergo reprogramming. Cell identity specifications are generally associated …