Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals
…, FS Schenkel, G Sahana, A Govignon-Gion, S Boitard… - Nature …, 2018 - nature.com
Stature is affected by many polymorphisms of small effect in humans 1 . In contrast, variation
in dogs, even within breeds, has been suggested to be largely due to variants in a small …
in dogs, even within breeds, has been suggested to be largely due to variants in a small …
[HTML][HTML] Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection
Through their domestication and subsequent selection, sheep have been adapted to thrive
in a diverse range of environments. To characterise the genetic consequence of both …
in a diverse range of environments. To characterise the genetic consequence of both …
Uncovering adaptation from sequence data: lessons from genome resequencing of four cattle breeds
Detecting the molecular basis of adaptation is one of the major questions in population genetics.
With the advance in sequencing technologies, nearly complete interrogation of genome-…
With the advance in sequencing technologies, nearly complete interrogation of genome-…
[HTML][HTML] Inferring population size history from large samples of genome-wide molecular data-an approximate Bayesian computation approach
Inferring the ancestral dynamics of effective population size is a long-standing question in
population genetics, which can now be tackled much more accurately thanks to the massive …
population genetics, which can now be tackled much more accurately thanks to the massive …
[HTML][HTML] Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems
Background Variable selection on high throughput biological data, such as gene expression
or single nucleotide polymorphisms (SNPs), becomes inevitable to select relevant …
or single nucleotide polymorphisms (SNPs), becomes inevitable to select relevant …
Detecting signatures of selection through haplotype differentiation among hierarchically structured populations
MI Fariello, S Boitard, H Naya, M SanCristobal… - Genetics, 2013 - academic.oup.com
The detection of molecular signatures of selection is one of the major concerns of modern
population genetics. A widely used strategy in this context is to compare samples from several …
population genetics. A widely used strategy in this context is to compare samples from several …
[HTML][HTML] On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?
Most species are structured and influenced by processes that either increased or reduced
gene flow between populations. However, most population genetic inference methods …
gene flow between populations. However, most population genetic inference methods …
Detecting selection in population trees: the Lewontin and Krakauer test extended
M Bonhomme, C Chevalet, B Servin, S Boitard… - Genetics, 2010 - academic.oup.com
Detecting genetic signatures of selection is of great interest for many research issues. Common
approaches to separate selective from neutral processes focus on the variance of F ST …
approaches to separate selective from neutral processes focus on the variance of F ST …
[HTML][HTML] Selection signatures in worldwide sheep populations
…, MS Cristobal, S Boitard - PloS one, 2014 - journals.plos.org
The diversity of populations in domestic species offers great opportunities to study genome
response to selection. The recently published Sheep HapMap dataset is a great example of …
response to selection. The recently published Sheep HapMap dataset is a great example of …
[HTML][HTML] Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection
…, S Comarmond, C Chaparro, E Toulza, S Boitard… - Microbiome, 2022 - Springer
Background The interaction of organisms with their surrounding microbial communities
influences many biological processes, a notable example of which is the shaping of the immune …
influences many biological processes, a notable example of which is the shaping of the immune …