Switching sides: how endogenous retroviruses protect us from viral infections
S Srinivasachar Badarinarayan, D Sauter - Journal of Virology, 2021 - Am Soc Microbiol
Long disregarded as junk DNA or genomic dark matter, endogenous retroviruses (ERVs)
have turned out to represent important components of the antiviral immune response. These …
have turned out to represent important components of the antiviral immune response. These …
[PDF][PDF] Systematic functional analysis of SARS-CoV-2 proteins uncovers viral innate immune antagonists and remaining vulnerabilities
…, C Conzelmann, JA Müller, SS Badarinarayan… - Cell reports, 2021 - cell.com
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) evades most innate immune
responses but may still be vulnerable to some. Here, we systematically analyze the impact …
responses but may still be vulnerable to some. Here, we systematically analyze the impact …
HIV-1 infection activates endogenous retroviral promoters regulating antiviral gene expression
S Srinivasachar Badarinarayan… - Nucleic Acids …, 2020 - academic.oup.com
Although endogenous retroviruses (ERVs) are known to harbor cis-regulatory elements, their
role in modulating cellular immune responses remains poorly understood. Using an RNA-…
role in modulating cellular immune responses remains poorly understood. Using an RNA-…
[HTML][HTML] SARS-CoV-2 infection induces epigenetic changes in the LTR69 subfamily of endogenous retroviruses
A Arora, JE Kolberg, S Srinivasachar Badarinarayan… - Mobile DNA, 2023 - Springer
Accumulating evidence suggests that endogenous retroviruses (ERVs) play an important
role in the host response to infection and the development of disease. By analyzing ChIP-…
role in the host response to infection and the development of disease. By analyzing ChIP-…
[HTML][HTML] Not all viruses cause disease: HERV-K (HML-2) in healthy human tissues
S Srinivasachar Badarinarayan, D Sauter - PLoS Biology, 2022 - journals.plos.org
… Citation: Srinivasachar Badarinarayan S, Sauter D (2022) Not all viruses cause disease:
HERV-K(HML-2) in healthy human tissues. PLoS Biol 20(10): e3001884. https://doi.org/10.1371/journal.pbio.3001884 …
HERV-K(HML-2) in healthy human tissues. PLoS Biol 20(10): e3001884. https://doi.org/10.1371/journal.pbio.3001884 …
[PDF][PDF] An additional NF-κB site allows HIV-1 subtype C to evade restriction by nuclear PYHIN proteins
Subtype C is the most prevalent clade of human immunodeficiency virus type 1 (HIV-1)
worldwide. The reasons for this are poorly understood. Here, we demonstrate that a characteristic …
worldwide. The reasons for this are poorly understood. Here, we demonstrate that a characteristic …
SARS-CoV-2 infection activates endogenous retroviruses of the LTR69 subfamily
A Arora, JE Kolberg, SS Badarinarayan, D Munot… - bioRxiv, 2023 - biorxiv.org
Accumulating evidence suggests that endogenous retroviruses (ERVs) play an important role
in the host response to infection and the development of disease. By combining RNA- and …
in the host response to infection and the development of disease. By combining RNA- and …
Imperfect innate immune antagonism renders SARS-CoV-2 vulnerable towards IFN-γ and-λ
…, F Zech, C Conzelmann, JA Müller, SS Badarinarayan… - BioRxiv, 2020 - biorxiv.org
The innate immune system efficiently defends the human host against viral pathogens. Thus,
viruses evolved strategies to counteract immune activation. Here, we systematically …
viruses evolved strategies to counteract immune activation. Here, we systematically …
[HTML][HTML] Evolutionary plasticity of SH3 domain binding by Nef proteins of the HIV-1/SIVcpz lentiviral lineage
…, R Lotke, S Srinivasachar Badarinarayan… - PLoS …, 2021 - journals.plos.org
The accessory protein Nef of human and simian immunodeficiency viruses (HIV and SIV) is
an important pathogenicity factor known to interact with cellular protein kinases and other …
an important pathogenicity factor known to interact with cellular protein kinases and other …
SARS-CoV-2 infection activates endogenous retroviruses of the LTR69 subfamily (preprint)
A Arora, JE Kolberg, SS Badarinarayan, D Munot… - 2023 - pesquisa.bvsalud.org
Accumulating evidence suggests that endogenous retroviruses (ERVs) play an important
role in the host response to infection and the development of disease. By combining RNA-and …
role in the host response to infection and the development of disease. By combining RNA-and …