Clinal variation in PHY (PAS domain) and CRY (CCT domain)—Signs of local adaptation to light quality in Norway spruce

SS Ranade, MR García‐Gil - Plant, Cell & Environment, 2023 - Wiley Online Library
Detection of the genomic basis of local adaptation to environmental conditions is challenging
in forest trees. Phytochromes (PHY) and cryptochromes (CRY) perceive the red (R)/far‐red …

[HTML][HTML] Transcriptome analysis of shade avoidance and shade tolerance in conifers

SS Ranade, N Delhomme, MR García-Gil - Planta, 2019 - Springer
Main conclusion Gymnosperms respond differently to light intensity and R:FR; although
some aspects of shade response appear conserved, yet underlying mechanisms seem to be …

Enhanced lignin synthesis and ecotypic variation in defense‐related gene expression in response to shade in Norway spruce

SS Ranade, G Seipel, A Gorzsás… - Plant, Cell & …, 2022 - Wiley Online Library
During the growth season, northern forests in Sweden daily receive more hours of far‐red (FR)‐enriched
light or twilight (shade) as compared to southern forests. Norway spruce (shade…

[HTML][HTML] Molecular signatures of local adaptation to light in Norway spruce

SS Ranade, MR García-Gil - Planta, 2021 - Springer
Main conclusion Transcriptomic and exome capture analysis reveal an adaptive cline for
shade tolerance in Norway spruce. Genes involved in the lignin pathway and immunity seem to …

[HTML][HTML] In silico characterization of putative gene homologues involved in somatic embryogenesis suggests that some conifer species may lack LEC2, one of the key …

SS Ranade, U Egertsdotter - BMC genomics, 2021 - Springer
Background Somatic embryogenesis (SE) is the process in which somatic embryos develop
from somatic tissue in vitro on medium in most cases supplemented with growth regulators. …

Differential response of Scots pine seedlings to variable intensity and ratio of red and far‐red light

A Razzak, SS Ranade, Å Strand… - Plant, Cell & …, 2017 - Wiley Online Library
We investigated the response to increasing intensity of red (R) and far‐R (FR) light and to a
decrease in R:FR ratio in Pinus sylvestris L. (Scots pine) seedling. The results showed that …

[HTML][HTML] Comparative in silicoanalysis of EST-SSRs in angiosperm and gymnosperm tree genera

SS Ranade, YC Lin, A Zuccolo, Y Van de Peer… - BMC plant biology, 2014 - Springer
Background Simple Sequence Repeats (SSRs) derived from Expressed Sequence Tags (ESTs)
belong to the expressed fraction of the genome and are important for gene regulation, …

Non-functional plastid ndh gene fragments are present in the nuclear genome of Norway spruce (Picea abies L. Karsch): insights from in silico analysis of nuclear …

SS Ranade, MR García-Gil, JA Rosselló - Molecular Genetics and …, 2016 - Springer
Many genes have been lost from the prokaryote plastidial genome during the early events of
endosymbiosis in eukaryotes. Some of them were definitively lost, but others were relocated …

Adaptive strategies of Scots pine under shade: Increase in lignin synthesis and ecotypic variation in defense‐related gene expression

SS Ranade, G Seipel, A Gorzsas… - Physiologia …, 2022 - Wiley Online Library
Shade is a stressful condition for plants characterized by low Red:Far‐Red (R:FR) ratio. The
northern latitudes in Sweden daily receive more hours of FR‐enriched light (twilight) or …

[HTML][HTML] Global gene expression analysis in etiolated and de-etiolated seedlings in conifers

SS Ranade, N Delhomme, MR Garcia-Gil - PloS one, 2019 - journals.plos.org
Plant life cycle begins with germination of seed below the ground. This is followed by
seedling’s development in the dark: skotomorphogenesis; and then a light-mediated growth: …