MicroRNA 29c is down-regulated in nasopharyngeal carcinomas, up-regulating mRNAs encoding extracellular matrix proteins
S Sengupta, JA den Boon, IH Chen… - Proceedings of the …, 2008 - National Acad Sciences
Using highly sensitive microarray-based procedures, we identified eight microRNAs (miRNAs)
showing robust differential expression between 31 laser-capture-microdissected …
showing robust differential expression between 31 laser-capture-microdissected …
Fundamental differences in cell cycle deregulation in human papillomavirus–positive and human papillomavirus–negative head/neck and cervical cancers
…, MA Newton, PF Lambert, JA Den Boon, S Sengupta… - Cancer research, 2007 - AACR
Human papillomaviruses (HPV) are associated with nearly all cervical cancers, 20% to 30%
of head and neck cancers (HNC), and other cancers. Because HNCs also arise in HPV-…
of head and neck cancers (HNC), and other cancers. Because HNCs also arise in HPV-…
Random-set methods identify distinct aspects of the enrichment signal in gene-set analysis
MA Newton, FA Quintana, JA Den Boon, S Sengupta… - 2007 - projecteuclid.org
… study of nasopharyngeal carcinoma (NPC) used the proposed methodology for category
enrichment [Sengupta et al. (2006)]. NPC is a cancer of the nasopharynx that is responsible …
enrichment [Sengupta et al. (2006)]. NPC is a cancer of the nasopharynx that is responsible …
Genome-wide expression profiling reveals EBV-associated inhibition of MHC class I expression in nasopharyngeal carcinoma
S Sengupta, JA Den Boon, IH Chen, MA Newton… - Cancer research, 2006 - AACR
To identify the molecular mechanisms by which EBV-associated epithelial cancers are
maintained, we measured the expression of essentially all human genes and all latent EBV …
maintained, we measured the expression of essentially all human genes and all latent EBV …
[HTML][HTML] The microRNAs of Epstein–Barr virus are expressed at dramatically differing levels among cell lines
Epstein–Barr Virus (EBV) encodes multiple microRNAs (miRNAs) from two primary transcripts,
BHRF1 and the BARTs. The expression of BHRF1 miRNAs is dependent on the type of …
BHRF1 and the BARTs. The expression of BHRF1 miRNAs is dependent on the type of …
[HTML][HTML] Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema
…, JM Bolin, N Leng, S Sengupta… - PLoS computational …, 2013 - journals.plos.org
The salamander has the remarkable ability to regenerate its limb after amputation. Cells at
the site of amputation form a blastema and then proliferate and differentiate to regrow the limb…
the site of amputation form a blastema and then proliferate and differentiate to regrow the limb…
MicroRNA 92b controls the G1/S checkpoint gene p57 in human embryonic stem cells
S Sengupta, J Nie, RJ Wagner, C Yang, R Stewart… - Stem …, 2009 - academic.oup.com
Human embryonic stem (ES) cells exhibit a shorter G 1 cell cycle phase than most somatic
cells. Here, we examine the role of an abundant, human ES cell-enriched microRNA, miR-92b…
cells. Here, we examine the role of an abundant, human ES cell-enriched microRNA, miR-92b…
Genes involved in DNA repair and nitrosamine metabolism and those located on chromosome 14q32 are dysregulated in nasopharyngeal carcinoma
LE Dodd, S Sengupta, IH Chen, JA Den Boon… - … Biomarkers & Prevention, 2006 - AACR
Polymorphisms in nitrosamine metabolism, DNA repair, and immune response genes have
been associated with nasopharyngeal carcinoma (NPC). Studies have suggested …
been associated with nasopharyngeal carcinoma (NPC). Studies have suggested …
Molecular detection and identification of influenza viruses by oligonucleotide microarray hybridization
S Sengupta, K Onodera, A Lai… - Journal of Clinical …, 2003 - Am Soc Microbiol
Microarrays of virus-specific oligonucleotides may provide a method of screening samples for
the presence or absence of a large variety of viruses simultaneously. Influenza viruses are …
the presence or absence of a large variety of viruses simultaneously. Influenza viruses are …
3-D culture and endothelial cells improve maturity of human pluripotent stem cell-derived hepatocytes
H Ardalani, S Sengupta, V Harms, V Vickerman… - Acta biomaterialia, 2019 - Elsevier
Human-induced pluripotent stem cell (hiPSC)-derived hepatocytes (iHEP) offer an attractive
alternative to primary human hepatocytes (PHH) for drug toxicity studies, as PHHs are …
alternative to primary human hepatocytes (PHH) for drug toxicity studies, as PHHs are …