MLH3: a DNA mismatch repair gene associated with mammalian microsatellite instability

SM Lipkin, V Wang, R Jacoby, S Banerjee-Basu… - Nature …, 2000 - nature.com
DNA mismatch repair is important because of its role in maintaining genomic integrity and
its association with hereditary non-polyposis colon cancer (HNPCC). To identify new human …

The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptors

AM Näär, JM Boutin, SM Lipkin, CY Victor… - Cell, 1991 - cell.com
Characterlxatlon of several thyroid hormone (T,), retinoic acid, and estrogen response
elements has led to the ldentlflcation of conserved DNA half-sites (core binding motifs). We …

[PDF][PDF] A pan-cancer mycobiome analysis reveals fungal involvement in gastrointestinal and lung tumors

AB Dohlman, J Klug, M Mesko, IH Gao, SM Lipkin… - Cell, 2022 - cell.com
Fungal microorganisms (mycobiota) comprise a small but immunoreactive component of the
human microbiome, yet little is known about their role in human cancers. Pan-cancer …

Mutation detection in patients with advanced cancer by universal sequencing of cancer-related genes in tumor and normal DNA vs guideline-based germline testing

…, MH Fleischut, E Salo-Mullen, M Trottier, SM Lipkin… - Jama, 2017 - jamanetwork.com
Importance Guidelines for cancer genetic testing based on family history may miss clinically
actionable genetic changes with established implications for cancer screening or prevention…

Meiotic arrest and aneuploidy in MLH3-deficient mice

SM Lipkin, PB Moens, V Wang, M Lenzi… - Nature …, 2002 - nature.com
MutL homolog 3 (Mlh3) is a member of a family of proteins conserved during evolution and
having dual roles in DNA mismatch repair and meiosis 1, 2. The pathway in eukaryotes …

Three-dimensional reconstruction of protein networks provides insight into human genetic disease

X Wang, X Wei, B Thijssen, J Das, SM Lipkin… - Nature …, 2012 - nature.com
To better understand the molecular mechanisms and genetic basis of human disease, we
systematically examine relationships between 3,949 genes, 62,663 mutations and 3,453 …

Integrative annotation of variants from 1092 humans: application to cancer genomics

…, Y Kong, K Lage, V Liluashvili, SM Lipkin… - Science, 2013 - science.org
Introduction Plummeting sequencing costs have led to a great increase in the number of
personal genomes. Interpreting the large number of variants in them, particularly in noncoding …

[PDF][PDF] A microRNA miR-34a-regulated bimodal switch targets Notch in colon cancer stem cells

…, S Lee, W Zipfel, MM Jin, ZH Gümüş, SM Lipkin… - Cell stem cell, 2013 - cell.com
microRNAs regulate developmental cell-fate decisions, tissue homeostasis, and oncogenesis
in distinct ways relative to proteins. Here, we show that the tumor suppressor microRNA …

[HTML][HTML] Genetic regulation of OAS1 nonsense-mediated decay underlies association with COVID-19 hospitalization in patients of European and African ancestries

…, NT Joseph, HB Kim, RJ Kreitman, BR Korf, SM Lipkin… - Nature …, 2022 - nature.com
The chr12q24.13 locus encoding OAS1–OAS3 antiviral proteins has been associated with
coronavirus disease 2019 (COVID-19) susceptibility. Here, we report genetic, functional and …

NOTCH Signaling Is Required for Formation and Self-Renewal of Tumor-Initiating Cells and for Repression of Secretory Cell Differentiation in Colon Cancer

…, D Dizon, RA Edwards, ML Waterman, SM Lipkin - Cancer research, 2010 - AACR
NOTCH signaling is critical for specifying the intestinal epithelial cell lineage and for initiating
colorectal adenomas and colorectal cancers (CRC). Based on evidence that NOTCH is …