User profiles for Sukanya Iyer

Sukanya Iyer

- Verified email at umassmed.edu - Cited by 489

Sukanya Iyer

- Verified email at case.edu - Cited by 39

Expression optimization and synthetic gene networks in cell-free systems

DK Karig, S Iyer, ML Simpson… - Nucleic acids …, 2012 - academic.oup.com
Synthetic biology offers great promise to a variety of applications through the forward engineering
of biological function. Most efforts in this field have focused on employing living cells, …

Precise therapeutic gene correction by a simple nuclease-induced double-stranded break

S Iyer, S Suresh, D Guo, K Daman, JCJ Chen, P Liu… - Nature, 2019 - nature.com
Current programmable nuclease-based methods (for example, CRISPR–Cas9) for the precise
correction of a disease-causing genetic mutation harness the homology-directed repair …

Distinct mechanisms coordinate transcription and translation under carbon and nitrogen starvation in Escherichia coli

S Iyer, D Le, BR Park, M Kim - Nature microbiology, 2018 - nature.com
Bacteria adapt to environmental stress by producing proteins that provide stress protection.
However, stress can severely perturb the kinetics of gene expression, disrupting protein …

Efficient homology-directed repair with circular single-stranded DNA donors

S Iyer, A Mir, J Vega-Badillo, BP Roscoe… - The CRISPR …, 2022 - liebertpub.com
While genome editing has been revolutionized by the advent of CRISPR-based nucleases,
difficulties in achieving efficient, nuclease-mediated, homology-directed repair (HDR) still …

[HTML][HTML] Multi-input regulation and logic with T7 promoters in cells and cell-free systems

S Iyer, DK Karig, SE Norred, ML Simpson, MJ Doktycz - PLoS One, 2013 - journals.plos.org
Engineered gene circuits offer an opportunity to harness biological systems for biotechnological
and biomedical applications. However, reliance on native host promoters for the …

Absolute quantitative measurement of transcriptional kinetic parameters in vivo

S Iyer, BR Park, M Kim - Nucleic acids research, 2016 - academic.oup.com
mRNA expression involves transcription initiation, elongation and degradation. In cells, these
dynamic processes are highly regulated. However, experimental characterization of the …

A protease-activated fluorescent probe allows rapid visualization of keratinocyte carcinoma during excision

E Walker, Y Liu, IY Kim, M Biro, SR Iyer, H Ezaldein… - Cancer research, 2020 - AACR
A fluorescent-probe-tumor-visualization platform was developed and validated in human
keratinocyte carcinoma excision specimens that may provide simple, rapid, and global …

Thrombin-mediated transcriptional regulation using DNA aptamers in DNA-based cell-free protein synthesis

S Iyer, MJ Doktycz - ACS synthetic biology, 2014 - ACS Publications
Realizing the potential of cell-free systems will require development of ligand-sensitive
gene promoters that control gene expression in response to a ligand of interest. Here, we …

Functional restoration of mouse Nf1 nonsense alleles in differentiated cultured neurons

C Wu, S Iyer, SA Wolfe, A Jacobson - Journal of Human Genetics, 2022 - nature.com
Neurofibromatosis type 1 (NF1), one of the most common autosomal dominant genetic
disorders, is caused by mutations in the NF1 gene. NF1 patients have a wide variety of …

Molecular imaging and validation of margins in surgically excised nonmelanoma skin cancer specimens

Y Liu, E Walker, SR Iyer, M Biro, IY Kim… - Journal of Medical …, 2019 - spiedigitallibrary.org
In an effort to increase the efficiency and cure rate of nonmelanoma skin cancer (NMSC)
excisions, we have developed a point-of-care method of imaging and evaluation of skin cancer …