[HTML][HTML] Expanded encyclopaedias of DNA elements in the human and mouse genomes
The human and mouse genomes contain instructions that specify RNAs and proteins and
govern the timing, magnitude, and cellular context of their production. To better delineate these …
govern the timing, magnitude, and cellular context of their production. To better delineate these …
[HTML][HTML] Occupancy maps of 208 chromatin-associated proteins in one human cell type
EC Partridge, SB Chhetri, JW Prokop, RC Ramaker… - Nature, 2020 - nature.com
Transcription factors are DNA-binding proteins that have key roles in gene regulation 1 , 2 .
Genome-wide occupancy maps of transcriptional regulators are important for understanding …
Genome-wide occupancy maps of transcriptional regulators are important for understanding …
Characterization of coding/noncoding variants for SHROOM3 in patients with CKD
…, NC Yeo, C Ottmann, SB Chhetri… - Journal of the …, 2018 - journals.lww.com
Background Interpreting genetic variants is one of the greatest challenges impeding analysis
of rapidly increasing volumes of genomic data from patients. For example, SHROOM3 is an …
of rapidly increasing volumes of genomic data from patients. For example, SHROOM3 is an …
[HTML][HTML] sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression
Genetic regulation of gene expression, revealed by expression quantitative trait loci (eQTLs),
exhibits complex patterns of tissue-specific effects. Characterization of these patterns may …
exhibits complex patterns of tissue-specific effects. Characterization of these patterns may …
[PDF][PDF] The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models
…, S Banskota, GB Corona, S Chee, SB Chhetri… - Cell, 2023 - cell.com
Understanding how genetic variants impact molecular phenotypes is a key goal of functional
genomics, currently hindered by reliance on a single haploid reference genome. Here, we …
genomics, currently hindered by reliance on a single haploid reference genome. Here, we …
[HTML][HTML] The complex, dynamic SpliceOme of the small GTPase transcripts altered by technique, sex, genetics, tissue specificity, and RNA base editing
…, CP Bupp, S Rajasekaran, X Li, SB Chhetri… - Frontiers in Cell and …, 2022 - frontiersin.org
The small GTPase family is well-studied in cancer and cellular physiology. With 162 annotated
human genes, the family has a broad expression throughout cells of the body. Members …
human genes, the family has a broad expression throughout cells of the body. Members …
[HTML][HTML] Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes
…, JC Rivera-Mulia, J Rozowsky, J Zhang, SB Chhetri… - Nature, 2022 - nature.com
… Charles B. Epstein … Surya B. Chhetri …
[HTML][HTML] Transcriptional analysis of the multiple Sry genes and developmental program at the onset of testis differentiation in the rat
JW Prokop, SB Chhetri, JE van Veen, X Chen… - Biology of sex …, 2020 - Springer
Background The commonly used laboratory rat, Rattus norvegicus, is unique in having multiple
Sry gene copies found on the Y chromosome, with different copies encoding amino acid …
Sry gene copies found on the Y chromosome, with different copies encoding amino acid …
[HTML][HTML] Sources of gene expression variation in a globally diverse human cohort
Genetic variation influencing gene expression and splicing is a key source of phenotypic
diversity. Though invaluable, studies investigating these links in humans have been strongly …
diversity. Though invaluable, studies investigating these links in humans have been strongly …
Ethnopharmacological survey, Phytochemical screening and Antibacterial activity measurements of high altitude medicinal plants of Nepal: A bioprospecting …
J Lamichhane, SB Chhetri, M Bhandari, S Pokhrel… - 2014 - nopr.niscpr.res.in
The ethnopharmacological survey was undertaken to collect information about the use of
seven most used medicinal plants, viz. Gentiana depressa D. Don, Rhododendron setosum D. …
seven most used medicinal plants, viz. Gentiana depressa D. Don, Rhododendron setosum D. …