Influence of the nitrification inhibitor 3, 4-dimethylpyrazole phosphate (DMPP) on ammonia-oxidizing bacteria and archaea in rhizosphere and bulk soil
K Kleineidam, K Košmrlj, S Kublik, I Palmer, H Pfab… - Chemosphere, 2011 - Elsevier
In agricultural plant production nitrification inhibitors like 3,4-dimethylpyrazole phosphate (DMPP)
are used to retard the microbial nitrification process of fertilized ammonium to enhance …
are used to retard the microbial nitrification process of fertilized ammonium to enhance …
[HTML][HTML] Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus
…, TV Marques, RSC Barone, JEP Cyrino, S Kublik… - Microbiome, 2019 - Springer
Background Aquaculture is on the rise worldwide, and the use of antibiotics is fostering higher
production intensity. However, recent findings suggest that the use of antibiotics comes at …
production intensity. However, recent findings suggest that the use of antibiotics comes at …
[HTML][HTML] Cowpea nodules harbor non-rhizobial bacterial communities that are shaped by soil type rather than plant genotype
…, PI Fernandes-Júnior, A Hofmann, S Kublik… - Frontiers in Plant …, 2017 - frontiersin.org
Many studies have been pointing to a high diversity of bacteria associated to legume root
nodules. Even though most of these bacteria do not form nodules with legumes themselves, it …
nodules. Even though most of these bacteria do not form nodules with legumes themselves, it …
Environmental and mucosal microbiota and their role in childhood asthma
LT Birzele, M Depner, MJ Ege, M Engel, S Kublik… - Allergy, 2017 - Wiley Online Library
Background High microbial diversity in the environment has been associated with lower
asthma risk, particularly in children exposed to farming. It remains unclear whether this effect …
asthma risk, particularly in children exposed to farming. It remains unclear whether this effect …
Novel oligonucleotide primers reveal a high diversity of microbes which drive phosphorous turnover in soil
Phosphorus (P) is of central importance for cellular life but likewise a limiting macronutrient
in numerous environments. Certainly microorganisms have proven their ability to increase …
in numerous environments. Certainly microorganisms have proven their ability to increase …
pH as a driver for ammonia-oxidizing archaea in forest soils
In this study, we investigated the impact of soil pH on the diversity and abundance of archaeal
ammonia oxidizers in 27 different forest soils across Germany. DNA was extracted from …
ammonia oxidizers in 27 different forest soils across Germany. DNA was extracted from …
[HTML][HTML] Pre-digest of unprotected DNA by Benzonase improves the representation of living skin bacteria and efficiently depletes host DNA
…, RL Silva, OA Ishola, BU Foesel, S Kublik… - Microbiome, 2021 - Springer
Background The identification of microbiota based on next-generation sequencing (NGS) of
extracted DNA has drastically improved our understanding of the role of microbial …
extracted DNA has drastically improved our understanding of the role of microbial …
[HTML][HTML] Pollution from azithromycin-manufacturing promotes macrolide-resistance gene propagation and induces spatial and seasonal bacterial community shifts in …
Effluents from antibiotic manufacturing may contain high concentrations of antibiotics, which
are the main driving force behind the selection and spread of antibiotic resistance genes in …
are the main driving force behind the selection and spread of antibiotic resistance genes in …
[HTML][HTML] Microplastics in soil induce a new microbial habitat, with consequences for bulk soil microbiomes
S Kublik, S Gschwendtner, T Magritsch… - Frontiers in …, 2022 - frontiersin.org
Microplastic (MP) pollution poses a threat to agricultural soils and may induce a significant
loss of the soil quality and services provided by these ecosystems. Studies in marine …
loss of the soil quality and services provided by these ecosystems. Studies in marine …
[HTML][HTML] Darier's disease exhibits a unique cutaneous microbial dysbiosis associated with inflammation and body malodour
…, SA Steimle-Grauer, S Niedermeier, S Kublik… - Microbiome, 2023 - Springer
Background Darier’s disease (DD) is a genodermatosis caused by mutations of the ATP2A2
gene leading to disrupted keratinocyte adhesion. Recurrent episodes of skin inflammation …
gene leading to disrupted keratinocyte adhesion. Recurrent episodes of skin inflammation …