User profiles for Svetlana Dodonova

Svetlana Dodonova

EMBL, Heidelberg
Verified email at embl.de
Cited by 1163

The interaction landscape between transcription factors and the nucleosome

…, E Kaasinen, B Sahu, Y Yin, B Wei, SO Dodonova… - Nature, 2018 - nature.com
Nucleosomes cover most of the genome and are thought to be displaced by transcription
factors in regions that direct gene expression. However, the modes of interaction between …

Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function

SO Dodonova, F Zhu, C Dienemann, J Taipale… - Nature, 2020 - nature.com
‘Pioneer’ transcription factors are required for stem-cell pluripotency, cell differentiation and
cell reprogramming 1 , 2 . Pioneer factors can bind nucleosomal DNA to enable gene …

The structure of the COPI coat determined within the cell

YS Bykov, M Schaffer, SO Dodonova, S Albert… - Elife, 2017 - elifesciences.org
10.7554/eLife.32493.001 COPI-coated vesicles mediate trafficking within the Golgi apparatus
and from the Golgi to the endoplasmic reticulum. The structures of membrane protein coats…

9Å structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments

SO Dodonova, P Aderhold, J Kopp, I Ganeva… - Elife, 2017 - elifesciences.org
10.7554/eLife.26691.001 COPI coated vesicles mediate trafficking within the Golgi apparatus
and between the Golgi and the endoplasmic reticulum. Assembly of a COPI coated vesicle …

[PDF][PDF] An organized co-assembly of clathrin adaptors is essential for endocytosis

M Skruzny, A Desfosses, S Prinz, SO Dodonova… - Developmental Cell, 2015 - cell.com
Clathrin-mediated endocytosis, the main trafficking route from the plasma membrane to the
cytoplasm, is critical to many fundamental cellular processes. Clathrin, coupled to the …

Structure of the Ty3/Gypsy retrotransposon capsid and the evolution of retroviruses

SO Dodonova, S Prinz, V Bilanchone… - Proceedings of the …, 2019 - National Acad Sciences
Retroviruses evolved from long terminal repeat (LTR) retrotransposons by acquisition of
envelope functions, and subsequently reinvaded host genomes. Together, endogenous …

[HTML][HTML] Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory

…, M Engeholm, C Dienemann, S Dodonova… - Nature structural & …, 2022 - nature.com
Throughout the genome, nucleosomes often form regular arrays that differ in nucleosome
repeat length (NRL), occupancy of linker histone H1 and transcriptional activity. Here, we …

[HTML][HTML] Influence of the Synthesis Scheme of Nanocrystalline Cerium Oxide and Its Concentration on the Biological Activity of Cells Providing Wound Regeneration

…, EB Artyushkova, AA Kryukov, SA Dodonova… - International Journal of …, 2023 - mdpi.com
In the ongoing search for practical uses of rare-earth metal nanoparticles, cerium dioxide
nanoparticles (nanoceria) have received special attention. The purpose of this research was to …

Cyclosis-related asymmetry of chloroplast–plasma membrane interactions at the margins of illuminated area in Chara corallina cells

SO Dodonova, AA Bulychev - Protoplasma, 2011 - Springer
Cytoplasmic streaming in plant cells is an effective means of intracellular transport. The cycling
of ions and metabolites between the cytosol and chloroplasts in illuminated cell regions …

[HTML][HTML] Effects of cyclosis on chloroplast–cytoplasm interactions revealed with localized lighting in characean cells at rest and after electrical excitation

AA Bulychev, SO Dodonova - Biochimica et Biophysica Acta (BBA) …, 2011 - Elsevier
Cytoplasmic streaming in Characean internodes enables rapid intracellular transport and
facilitates interactions between spatially remote cell regions. Cyclosis-mediated distant …